Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci8g1477 | ATGGAGTCACCGGTGACCAGTAGAATGACAGAGCTGATGGCGGAGGACAGAAGGCCGGACGAGGGTTCGAAGATTCTGGAAAATCCTCAAGCTCTCTCTCCACCGACCAGCACGCACGGATCTGATAAAGAGAAAGAAAGAAGAGGAATATGTGATGAAGATTCAAAGGGTAATGGCATAGGAGTGATCACTATCTGGGGAATGGGAGGGTTGGGTAAAACCACCCTTGCTCAGCTCCTTTACAATGATGAGAAGGTGCAGGAGCATTTCGATTTGAAGGCTTGGGCATGTGTTTCAGATGATTTTAGTGTTTTAGAGGTGATAAGGAATCTTCTTGAGTCTGTCACTTCAAAAGTCTATGATAATAAAAATCTAGACTTTCTTTATGTTGAATTAAGGAATAGCTTGAGTAATAAAAAGTTTTTGATGGTGTTGGATGATCTATGGAATGAGAAATATAGTCATTGGGATGACCTTGTAACTCCTTTTCACAGTGGAAGAAGGGGAAGCAAAATCATCGTAACAACTTATCAAAAAAGAGTTGTTGAAATCACTCATACCTTTCCTGTACATGAGTTGCGCTGTCTCTCCGATAATAATTGTTGGCTTTTACTCTCCAAGCATGCATTTGCAAATGAAGATCCAAACAGATATCCAGAGCTAGGAGCAATCGGTAAGCAAATTGCAAGAAAATGTGGTGGCCTCCCAATTGCTGTGAAAACTATTGGAGGTCTTTTGCGTTCAAAAGTGGATGAAAAGGAATGGAGTAAAATTCTAAATAGCAACCAATGGGGCATACCAAATGATGATGTTATGCCTGCTTTGCGTCTGAGTTATCTCTATCTTCCATCACATTTGAAGAAATGCTTTGCTTATTGCTCAGTCTTCCCTAAAGATATGTTGTTAGACAAAAAGAAATTGGTCTTGTTATGA | 933 | 0.4019 | MESPVTSRMTELMAEDRRPDEGSKILENPQALSPPTSTHGSDKEKERRGICDEDSKGNGIGVITIWGMGGLGKTTLAQLLYNDEKVQEHFDLKAWACVSDDFSVLEVIRNLLESVTSKVYDNKNLDFLYVELRNSLSNKKFLMVLDDLWNEKYSHWDDLVTPFHSGRRGSKIIVTTYQKRVVEITHTFPVHELRCLSDNNCWLLLSKHAFANEDPNRYPELGAIGKQIARKCGGLPIAVKTIGGLLRSKVDEKEWSKILNSNQWGIPNDDVMPALRLSYLYLPSHLKKCFAYCSVFPKDMLLDKKKLVLL | 310 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci8g1477 | 310 | Gene3D | - | 278 | 310 | IPR036388 | - | |
| Prci8g1477 | 310 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
| Prci8g1477 | 310 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 57 | 293 | IPR027417 | - | |
| Prci8g1477 | 310 | Gene3D | - | 27 | 188 | IPR027417 | - | |
| Prci8g1477 | 310 | Gene3D | - | 195 | 277 | IPR042197 | - | |
| Prci8g1477 | 310 | MobiDBLite | consensus disorder prediction | 39 | 53 | - | - | |
| Prci8g1477 | 310 | FunFam | Probable disease resistance protein At1g61300 | 46 | 187 | - | - | |
| Prci8g1477 | 310 | PANTHER | DISEASE RESISTANCE PROTEIN RP | 41 | 310 | IPR044974 | GO:0006952 | |
| Prci8g1477 | 310 | Pfam | NB-ARC domain | 55 | 261 | IPR002182 | GO:0043531 | |
| Prci8g1477 | 310 | PRINTS | Disease resistance protein signature | 62 | 77 | - | - | |
| Prci8g1477 | 310 | PRINTS | Disease resistance protein signature | 232 | 246 | - | - | |
| Prci8g1477 | 310 | PRINTS | Disease resistance protein signature | 135 | 149 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci8g1477 | Prci-Chr8 | 11756689 | 11762974 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci8g1477 | 63 | 266 | WRKY Transcription Factor Family | AT4G12020 | 26.293 | 1.24e-06 | 48.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci8g1477 | - | - | pcin:129317304 | 615.15 |