Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1473 ATGGACGCAGCAGTACTAGGAGCCTTTCTCTCTCCGACCTTCCAGACCATACTAGACATTATCACCTCAAGTAAATTTCGAGATTTTGTTAAGGATAGAAACCTGAATGTTTCACTCTTGGATGAGCTGAAGATAACTCTCATTATCCTTGATGCTATTCTCAATGATGCTGAAGAGAAGCAAATCACTGGCCCTGCCGTCAAGAAATGGCTTGAAGAGTTGAAAGATGCCGCTTATGATGCAGAGGATTTATTAGATGAAATCAACACTGACTCTCTCAGATGGCAGGTGGAACAAGATTCTGATGAAGGCGTTGCTGATAAGGTGCACTCTTTCCTTTCTTATACTTTTGGTGATTGCTACTGGGACATGAACATGAAGCTTGAAGCAATTTACCGAAGGCTTAAACACTTCGCTGAACAAAAGGATTTCCCTCATTTGCAAAGTGTTAGCCGGAGGGCTCATAAAACAACTACTACTTCATTAATAAATGAATCTGTTGTAGTTGGTAGAGAGGATGATAAGGACAAAATGTTGAAAATGCTTGTGCGTGATGAAAATGCAAAGGGTAATGATATAGGAGTGATCACTATCTGGGGCATGGGTGGGGTAGGTAAAACTACCCTTGCTCAACTCCTTTACAATGACGAGGAAGTGCAGAAGCATTTTGATTTGAAGGCTTGGGCATGTGTTTCAGAAGATTTCAATGCCTTTGAGGTGACCAAGAATATTCTAGAATCTGTCACTTCAAAAGCCTATAATAGTAAAAATCTAGATTTCCTTCGAGTTGAACTGAAAAATAGCTTGAAGGATAACAAGTTTTTGATTGTATTTGATGATTTATGGAATGAGAAATATAGTGATTGGGATGATCTAGTTTCTCCTTTTCGCAATGGAAAAGGGGGAAGTAAAATCATTGTCACAACTCGCCAACAAAGAGTTGTTGAAATCACACATACATTTCCTCCGTATAAATTGTCAACTCTCTCAAATGAAAATTGTTGGTTTTTAATTGCCAAGCATGCCCTTAAAATTGAGGATCATAAGAAGCATCCAAAGCTAGAAGCAATTGGAAGGAAAATTGCAAGGAAATGTTGTGGTCTACCAATTGCTGCTAGATCAATTGGAGGTCTCTTGCGTTCAAAAGCGGATGAAAAGGAATGGTGTAAAATTCTAAATAGTAATGTGTGGGACATACCAAGTGACGATGTTTTAACTTCTTTATATTTGAGTTATGTTTATCTTCCCCACATTTAA 1257 0.3835 MDAAVLGAFLSPTFQTILDIITSSKFRDFVKDRNLNVSLLDELKITLIILDAILNDAEEKQITGPAVKKWLEELKDAAYDAEDLLDEINTDSLRWQVEQDSDEGVADKVHSFLSYTFGDCYWDMNMKLEAIYRRLKHFAEQKDFPHLQSVSRRAHKTTTTSLINESVVVGREDDKDKMLKMLVRDENAKGNDIGVITIWGMGGVGKTTLAQLLYNDEEVQKHFDLKAWACVSEDFNAFEVTKNILESVTSKAYNSKNLDFLRVELKNSLKDNKFLIVFDDLWNEKYSDWDDLVSPFRNGKGGSKIIVTTRQQRVVEITHTFPPYKLSTLSNENCWFLIAKHALKIEDHKKHPKLEAIGRKIARKCCGLPIAARSIGGLLRSKADEKEWCKILNSNVWDIPSDDVLTSLYLSYVYLPHI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1473 418 Gene3D - 328 415 IPR042197 -
Prci8g1473 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 417 IPR027417 -
Prci8g1473 418 Coils Coil 67 91 - -
Prci8g1473 418 Gene3D - 123 320 IPR027417 -
Prci8g1473 418 PRINTS Disease resistance protein signature 365 379 - -
Prci8g1473 418 PRINTS Disease resistance protein signature 195 210 - -
Prci8g1473 418 PRINTS Disease resistance protein signature 268 282 - -
Prci8g1473 418 FunFam Probable disease resistance protein At1g61300 150 320 - -
Prci8g1473 418 PANTHER DISEASE RESISTANCE PROTEIN RP 68 417 IPR044974 GO:0006952
Prci8g1473 418 Pfam NB-ARC domain 172 393 IPR002182 GO:0043531
Prci8g1473 418 Coils Coil 40 60 - -
Prci8g1473 418 Gene3D - 38 119 - -
Prci8g1473 418 Pfam Rx N-terminal domain 38 101 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1473 Prci-Chr8 11691235 11692948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1473 192 344 WRKY Transcription Factor Family AT4G12020 26.286 9.03e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1473 - - pcin:129317301 824.313