Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1472 ATGGCTGAAGGTTTTGTACAACAATACTCCCAAGGGAAGATATTGGAGATAGAATCAGATAACTGCTTTAATGAATTACTATCTAGATCCTTCATTCAACAGCATGAAGGTGATCCAGAAAAGTTCATCATGCATGATCTCATCATTGATTTAGCCAGAGTTGTATCTGGTAACAGTTGTCTTTGGTTAGAAGGAGACAAAATTTCAAAAAATGTTCGCCGTTTATCGTATCCTAGACAAGGATATGATGGTTTTAAAATGTTTAAGGTCTTTTATCACCAAAATTCTTTGAGGACTTTTCTACCTCAAAAAACTTGGGCATTTATAAATTCATTTGTCTTGAGCAAAAAGGTCTCACATGATTTGTTGCCAAAACTAAAGTGTCTGAGAGTATTGTCTTTGTCTATGTATTCCAACATCACTGAGCTACCTGATTCAATTGGCAATTTGCAACATTTGCGATATCTTGATCTTTCCCACACCAAAATCACAAGGTTGCCTGATGCGACCTTCACACTTTGCAATTTGCAAACTTTGCCCTTATCATATTGCAAGTCTTTCAATGAATTTCCTAGGAGCATAGAAAAGCTGATCAATCTACGTCACTTGGACATTAGTGGCACTGCTTTGAAGGAGATGCCGGCACAAATCACCAAACTACAAAATCTTCATAGTATGAGTACTTTTGTGGTGGGAAAACAATCAGATGGATTGAGAATTAGGGAGTTAAAAAAGCTACCTCATCTTGAAGGTAAGCTTTCCATTTTGAAGTTACAAAATGTGCTTGATCCCATTGATGCTTTTGAGGCAAACTTGAAGATGAGAGAGAAAATTGAGGAGTTAGTTTTGGAATGGGATAGTGATTCTCAGTATTCACCAACAATAGTGCAAAATGTACTTAACATGATGCAACCTTCAACAAAGTTACAGAGATTGACCATCAACCATATGGTGGCCGGAGCTTTCCAAATTGGGTCGGAGATTCTTCATATACAAATGTTACTTTTTATGCATAAGCAATTGCAAAGATTGCTCATCACTTCCACCATTGGGACAATTACCTTCTCTTAA 1071 0.3688 MAEGFVQQYSQGKILEIESDNCFNELLSRSFIQQHEGDPEKFIMHDLIIDLARVVSGNSCLWLEGDKISKNVRRLSYPRQGYDGFKMFKVFYHQNSLRTFLPQKTWAFINSFVLSKKVSHDLLPKLKCLRVLSLSMYSNITELPDSIGNLQHLRYLDLSHTKITRLPDATFTLCNLQTLPLSYCKSFNEFPRSIEKLINLRHLDISGTALKEMPAQITKLQNLHSMSTFVVGKQSDGLRIRELKKLPHLEGKLSILKLQNVLDPIDAFEANLKMREKIEELVLEWDSDSQYSPTIVQNVLNMMQPSTKLQRLTINHMVAGAFQIGSEILHIQMLLFMHKQLQRLLITSTIGTITFS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1472 356 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 89 318 - -
Prci8g1472 356 Pfam Leucine rich repeat 152 210 IPR001611 GO:0005515
Prci8g1472 356 Gene3D Ribonuclease Inhibitor 104 354 IPR032675 -
Prci8g1472 356 SUPERFAMILY L domain-like 44 317 - -
Prci8g1472 356 SMART LRR_typ_2 150 173 IPR003591 -
Prci8g1472 356 SMART LRR_typ_2 197 220 IPR003591 -
Prci8g1472 356 ProSiteProfiles Leucine-rich repeat profile. 152 173 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1472 Prci-Chr8 11690090 11691160 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1472 140 226 WRKY Transcription Factor Family AT4G12020 40.909 3.57e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1472 - - pcin:129317300 707.597