Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1452 ATGGGTTGGAGATGGTGCTGTGTCATGCTAGTTCTATTACTGTTTGCTCCTTTCATGGCTTCTTCACGATCAATTATCAAGAACTTACCTGGCTTTTCTGGTGACCTCCCTTTCAAGCTTGAAACTGGATACATAGGAGTGGGAGAAGAAGAGGATGTGCAACTATTTTACTTATTTGTGGAGTCACAAAGAAATCCCTCTAAAGATCCAATCTTACTCTGGTTTGTTGGAGGCCCTGGTTGCTCTGCCCTTTCTGCATTTCTTTTTGAAAATGGACCAGTGACATTTGACAGAGAATCCAGTGGGATTCTTCCAACACTTATATTAAACCCTTATGCTTGGACGCAGGTACTCAATGTCATGTACATAGATTTACCAGTTGGCACAGGATTTTCTTACTCACAAACACAAGAAGGCTACCACAGCAGTGATATAATGTGGATAGAGAATGCATATGATTTTCTGCAAAAGTGGTTTATGGATCATCCTGAGTTTGGCTCAAATTCATTTTATGTTGGCGGTGGTTCATATTCAACTTTGCCTGCTGTTCCTCTTGTTAAAAAACTATATGAAGGTTTCAGAGCAGGAGGCAGTCCACTCATAAATATCAAGGGTCTTGTGCTTGCCAGCCCATCAACTGATGTGTTTCTGGATATGAACTCCCGAATTGTTTATGCACACCACCTGGGTCTTATATCAGATGAGCTCTATGAGTCAATTAAAGCAAGTTGTAATGGTGATTATGTCAACATGAATCCAAACAACACAAAGTGTGCCTCTGATTATGAAGCTTACTCTCAGGGTTATGATCACATACTTGTGAACCAATGGGCAAATAATGAGGATGTTAGGAAGGCTCTTCAGATTAGAGAGGGAACTAAAGGGGAGTTCTTGAGATGCAACAAGAGTTTATCATACAAATTTCATCTACAAAGTGTTGTTGATTATCATCGCAATTTCACTAAGACGAACCTTCAATGTCTTGTATACTGTGCTGATCTTGACTTGGCAGTACCACATATTAGTACACAAGCTTGGATTAAGTCTTTGAACATGAAAATTGAAGATCCTTGGCGTGCATGGTTTGTTGATGGCCAGGTTGCAGGATACACACAAATCTACAAGAACCATAACTACTTCTTGACATATGTTGCTGTGAAAGGTGCTGGTCATGTAGCTCAATCATATAAACCTAAAGAAGTTTTGCAAATGATAGACAGGTGGTTCTCATATTCCATTATTTAA 1245 0.396 MGWRWCCVMLVLLLFAPFMASSRSIIKNLPGFSGDLPFKLETGYIGVGEEEDVQLFYLFVESQRNPSKDPILLWFVGGPGCSALSAFLFENGPVTFDRESSGILPTLILNPYAWTQVLNVMYIDLPVGTGFSYSQTQEGYHSSDIMWIENAYDFLQKWFMDHPEFGSNSFYVGGGSYSTLPAVPLVKKLYEGFRAGGSPLINIKGLVLASPSTDVFLDMNSRIVYAHHLGLISDELYESIKASCNGDYVNMNPNNTKCASDYEAYSQGYDHILVNQWANNEDVRKALQIREGTKGEFLRCNKSLSYKFHLQSVVDYHRNFTKTNLQCLVYCADLDLAVPHISTQAWIKSLNMKIEDPWRAWFVDGQVAGYTQIYKNHNYFLTYVAVKGAGHVAQSYKPKEVLQMIDRWFSYSII 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1452 414 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Prci8g1452 414 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Prci8g1452 414 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Prci8g1452 414 PRINTS Carboxypeptidase C serine protease (S10) family signature 381 394 IPR001563 GO:0004185|GO:0006508
Prci8g1452 414 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 398 IPR001563 GO:0004185|GO:0006508
Prci8g1452 414 SUPERFAMILY alpha/beta-Hydrolases 26 410 IPR029058 -
Prci8g1452 414 FunFam Carboxypeptidase 266 413 - -
Prci8g1452 414 FunFam Serine carboxypeptidase-like 19 19 281 - -
Prci8g1452 414 Pfam Serine carboxypeptidase 269 410 IPR001563 GO:0004185|GO:0006508
Prci8g1452 414 Pfam Serine carboxypeptidase 30 267 IPR001563 GO:0004185|GO:0006508
Prci8g1452 414 Gene3D alpha/beta hydrolase 19 412 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1452 Prci-Chr8 11371360 11383501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1452 20 49 Calmodulin-binding Proteins AT2G22960 66.667 5.83e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1452 K16296 - qsu:112035786 480.715