Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1433 ATGATACTGTGGATTCTGGCTTTGTATGTGTTGTTATCTTTCATCATCGCTGGTCACTCAGCACCAGTTGCTACATATGGTGGTCATTCAGGTTTCATAAGCATAGATTGTGGAGCAAGCGAAGGTTATGTCGACGAACTAACTAGGATTCCCTACCAGACAGATAAAGGCTTCATAGAAAGCGGAACCAATCATGAAGTAGGCCTCAAATCCAGTCGTTTTCCATACATACAAAGACAGCTACAGACACTGCGAAGTTTTCCAGATGGAAAACGAAACTGTTACACTCTGAAACCAAAACAAGAGATGAATCAGAAGCAAAAGTACATGATCAGGGCTATCTTCGCATATCAGAACTACGACTACACAAGCCAACCTCCAACGTTTGCACTCCACCTGGGGGTCAATTATTGGACCACAATTGATAAAGATGATCCCTCTCTCACATATCGTGAAATCATAATCCAACTTACCAATGGCACTGTGCAAGTGTGTCTGGTACACATAGGACAAGGCACACCTTTCATCAACACTTTGGAATTAAGGCCACTGAACAACTCTCTTTATGCAGCGCCATTTCCATTATCTTTTCGAGTAAGGAGAGATTGTCGCATTGAGACTAAAAATTGGGCCAGGTACAAGGACGATGTGTATGATCGCTTGTGGTATCGACATGTTAATCCTGATTTGGTTCTCTTGAAAGCGCAAGTAAAAGTAGTCGAAAACTCTACTTATGAGCTACCATCAGAAATATTACTCACAGCATGTCAATCTCCAAATAAGTCCAATATCTTAAATGAAAGAGTGCCTGTGAGTCTTAAACTTGATAAACAGCATTATTTCTTTCTTCATTTCGCTGAAATTCAAAAGCTTCCTTCCGGCAAAAAGAGAATTCTCAATGTCACGATTGATGATGAATATTCTCTTTCTCAGAAACTTACTCTTGACTACTTGAAACCTGTCACCCTACATTTCAACAAGATAGTTACTACAATCTATGCTCACCTCACAGTCAGAGCAACTGCTGATTCTTATGCTCCTCCTATCATCAATGCCTTTGAGATCTTCGAAGTCATTCCAGAACCAGAGTCTCCTACCAATGCAAAAGATGTTTATGCCATCATGGAGATCAAGCGTGCCTATGGTATCTCCAAAATCAGTTGGCAAGGGGACCCTTGTGTGCCATATAACTTGGCATGGGAAGGTGTGCATTGCAGCTCGGGCAACAACACAAGAATCATTTCGTTGAACCTGAGCTCAAGCAAACTAACAAAAGAAATCGTTAAGTCATTCGTGGATTTGGAAAAATTGGAATCCTTGGATTTGTCCAACAATGAATTAAGGGGAGAATTACCAGAATTTCTCGCAAGTCTTCCTAATTTGAAATTCATTAATGTGACTGGAAACAAGCTGAGAGGTTCAATACCCAAGGCGTTGAAGGAAAATGCTAATTTGAATATCAGTGCAGCCGAGAATCCAGGCCTCTGTAGGAGAGATTCATGTGACCACATAAACAAGTTTGTTATTCCTCTTAGTACATCAATTGGAGTTTTAGTCCTAATTGCCATTCTCTCTTCGATGATTTGGAGACTCAAAAAGAAAAGACAAGATCTGTCAACCAAGTCCCTAATTCTAAAACAGAAGAATCGAGAATTTTCTTACTCACAAGTTGTTGATATCACCAACAATTTCAAAACTCTTATTGGAGAAGGAGGGTTTGGGAAAGTTTACCTTGGTACTTTAGAAGATGGTTCTCAAGTTGCAGTTAAATTGCTTTCTGCATCATCAAAGCAAGGATACAAGGAATTTCAATCTGAGGCTCAACTCCTAACTGTTATTCATCATCGAAACTTAGTTTCACTTGTTGGGTATTGTCATGAGGGCAACATCAAGGCATTGATTTATGAATATGTGGATAATGGGGACCTTGGCCATCTCTTAGAGAAAAACTCAAAAGTTTTGAAGTGGAATGAGAGACTTCAAGTTGCAATTGACACAGCAAAAGGATTGGAATATCTTCATGTTGGTTGTCATACTCCTATAATTCATAGAGACTTGAAACCATCCAATATTTTATTAAATAAATTCATGGTGGCCAAGATTGCTGATTTTGGACTATCTAGAGCCTTTATAAATGAAGGAGATTCTCATCTATCAACTCAACCTGCTGGTACTCCCGGTTATATTGATCCTGAATTTCAAAGATGTGGACAATTAAATAAGGAAAGTGACATTTATAGTTTTGGAATGATTCTTCTTCAACTAATAACTGGTCATCCTCCAATAAAGAGAGGTCCTAGGAATATTACTTTCATTCTTGATTGGGTTCAACCTAAAATTGAATGCGGCGATATTAAAGGCATTGTTGATCCAAGATTAGCAAGAGAATTCTATGTTACTTCAATATGGAAAGTTGTTGAAGTAGCAATGTTATGTGTCTTACCAACACCATCCCAAAGGCCAAACATAAGTTACATATTACAAGAACTACAAGAATGTTTGGCTTTGGAGATGGATCATGCAAGAATAGATAACACAATGCCCAGCAGCAGTTTACTAGATTATAGTGTGAATATTGAATCAATGACTATTCTCTCTGCTAGGTAG 2607 0.3867 MILWILALYVLLSFIIAGHSAPVATYGGHSGFISIDCGASEGYVDELTRIPYQTDKGFIESGTNHEVGLKSSRFPYIQRQLQTLRSFPDGKRNCYTLKPKQEMNQKQKYMIRAIFAYQNYDYTSQPPTFALHLGVNYWTTIDKDDPSLTYREIIIQLTNGTVQVCLVHIGQGTPFINTLELRPLNNSLYAAPFPLSFRVRRDCRIETKNWARYKDDVYDRLWYRHVNPDLVLLKAQVKVVENSTYELPSEILLTACQSPNKSNILNERVPVSLKLDKQHYFFLHFAEIQKLPSGKKRILNVTIDDEYSLSQKLTLDYLKPVTLHFNKIVTTIYAHLTVRATADSYAPPIINAFEIFEVIPEPESPTNAKDVYAIMEIKRAYGISKISWQGDPCVPYNLAWEGVHCSSGNNTRIISLNLSSSKLTKEIVKSFVDLEKLESLDLSNNELRGELPEFLASLPNLKFINVTGNKLRGSIPKALKENANLNISAAENPGLCRRDSCDHINKFVIPLSTSIGVLVLIAILSSMIWRLKKKRQDLSTKSLILKQKNREFSYSQVVDITNNFKTLIGEGGFGKVYLGTLEDGSQVAVKLLSASSKQGYKEFQSEAQLLTVIHHRNLVSLVGYCHEGNIKALIYEYVDNGDLGHLLEKNSKVLKWNERLQVAIDTAKGLEYLHVGCHTPIIHRDLKPSNILLNKFMVAKIADFGLSRAFINEGDSHLSTQPAGTPGYIDPEFQRCGQLNKESDIYSFGMILLQLITGHPPIKRGPRNITFILDWVQPKIECGDIKGIVDPRLAREFYVTSIWKVVEVAMLCVLPTPSQRPNISYILQELQECLALEMDHARIDNTMPSSSLLDYSVNIESMTILSAR 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1433 868 FunFam Leucine-rich repeat receptor-like protein kinase 540 637 - -
Prci8g1433 868 Gene3D Ribonuclease Inhibitor 373 495 IPR032675 -
Prci8g1433 868 CDD STKc_IRAK 568 832 - -
Prci8g1433 868 Gene3D Phosphorylase Kinase; domain 1 544 637 - -
Prci8g1433 868 Pfam Leucine rich repeat 415 471 IPR001611 GO:0005515
Prci8g1433 868 SUPERFAMILY Protein kinase-like (PK-like) 546 830 IPR011009 -
Prci8g1433 868 FunFam Leucine-rich repeat receptor-like kinase 369 498 - -
Prci8g1433 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 681 693 IPR008271 GO:0004672|GO:0006468
Prci8g1433 868 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 638 843 - -
Prci8g1433 868 ProSitePatterns Protein kinases ATP-binding region signature. 568 590 IPR017441 GO:0005524
Prci8g1433 868 Pfam Protein tyrosine and serine/threonine kinase 564 830 IPR001245 GO:0004672|GO:0006468
Prci8g1433 868 PANTHER OS07G0107800 PROTEIN-RELATED 33 838 - -
Prci8g1433 868 SMART serkin_6 562 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1433 868 Gene3D Transferase(Phosphotransferase) domain 1 638 849 - -
Prci8g1433 868 Pfam Malectin-like domain 35 358 IPR024788 -
Prci8g1433 868 ProSiteProfiles Leucine-rich repeat profile. 436 459 IPR001611 GO:0005515
Prci8g1433 868 ProSiteProfiles Protein kinase domain profile. 562 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1433 868 SUPERFAMILY L domain-like 395 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1433 Prci-Chr8 11156228 11164750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1433 29 835 Receptor kinase-like Gene Family AT2G19230 42.684 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci8g1433 Malectin_like 2.7e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1433 - - pcin:129289942 996.882