Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1432 ATGATACTGTGGATTCTGGCTTTGTATGTGTTGTTATCTTTCATCATCGCTGGTCACTCAGCACCAGTTGCTACATATGGTGGTCATTCAGGTTTCATAAGCATAGATTGTGGAGCAAGCGAAGGTTATGTCGACGAACTAACTAGGATTCCCTACCAGACAGATAAAGGCTTCATAGAAAGCGGAACCAATCATGAAGTAGGCCTCAAATCCAGTCGTTTTCCATACATACAAAGACAGCTACAGACACTGCGAAGTTTTCCAGATGGAAAACGAAACTGTTACACTCTGAAACCAAAACAAGAGATGAATCAGAAGCAAAAGTACATGATCAGGGCTATCTTCGCATATCAGAACTACGACTACACAAGCCAACCTCCAACGTTTGCACTCCACCTGGGGGTCAATTATTGGACCACAATTGATAAAGATGATCCCTCTCTCACATATCGTGAAATCATAATCCAACTTACCAATGGCACTGTGCAAGTGTGTCTGGTACACATAGGACAAGGCACACCTTTCATCAACACTTTGGAATTAAGGCCACTGAACAACTCTCTTTATGCAGCGCCATTTCCATTATCTTTTCGAGTAAGGAGAGATTGTCGCATTGAGACTAAAAATTGGGCCAGGTACAAGGACGATGTGTATGATCGCTTGTGGTATCGACATGTTAATCCTGATTTGGTTCTCTTGAAAGCGCAAGTAAAAGTAGTCGAAAACTCTACTTATGAGCTACCATCAGAAATATTACTCACAGCATGTCAATCTCCAAATAAGTCCAATATCTTAAATGAAAGAGTGCCTGTGAGTCTTAAACTTGATAAACAGCATTATTTCTTTCTTCATTTCGCTGAAATTCAAAAGCTTCCTTCCGGCAAAAAGAGAATTCTCAATGTCACGATTGATGATGAATATTCTCTTTCTCAGAAACTTACTCTTGACTACTTGAAACCTGTCACCCTACATTTCAACAAGATAGTTACTACAATCTATGCTCACCTCACAGTCAGAGCAACTGCTGATTCTTATGCTCCTCCTATCATCAATGCCTTTGAGATCTTCGAAGTCATTCCAGAACCAGAGTCTCCTACCAATGCAAAAGATGTTTATGCCATCATGGAGATCAAGCGTGCCTATGGTATCTCCAAAATCAGTTGGCAAGGGGACCCTTGTGTGCCATATAACTTGGCATGGGAAGGTGTGCATTGCAGCTCGGGCAACAACACAAGAATCATTTCGTTGGATTTGTCCAACAATGAATTAAGGGGAGAATTACCAGAATTTCTCGCAAGTCTTCCTAATTTGAAATTCATTAATGTGACTGGAAACAAGCTGAGAGGTTCAATACCCAAGGCGTTGAAGGAAAATGCTAATTTGAATATCAGTGCAGCCGAGAATCCAGGCCTCTGTAGGAGAGATTCATGTGACCACATAAACAAGTTTGTTATTCCTCTTAGTACATCAATTGGAGTTTTAGTCCTAATTGCCATTCTCTCTTCGATGATTTGGAGACTCAAAAAGAAAAGACAAGATCTGTCAACCAAGTCCCTAATTCTAAAACAGAAGAATCGAGAATTTTCTTACTCACAAGTTGTTGATATCACCAACAATTTCAAAACTCTTATTGGAGAAGGAGGGTTTGGGAAAGTTTACCTTGGTACTTTAGAAGATGGTTCTCAAGTTGCAGTTAAATTGCTTTCTGCATCATCAAAGCAAGGATACAAGGAATTTCAATCTGAGGCTCAACTCCTAACTGTTATTCATCATCGAAACTTAGTTTCACTTGTTGGGTATTGTCATGAGGGCAACATCAAGGCATTGATTTATGAATATGTGGATAATGGGGACCTTGGCCATCTCTTAGAGAAAAACTCAAAAGTTTTGAAGTGGAATGAGAGACTTCAAGTTGCAATTGACACAGCAAAAGGATTGGAATATCTTCATGTTGGTTGTCATACTCCTATAATTCATAGAGACTTGAAACCATCCAATATTTTATTAAATAAATTCATGGTGGCCAAGATTGCTGATTTTGGACTATCTAGAGCCTTTATAAATGAAGGAGATTCTCATCTATCAACTCAACCTGCTGGTACTCCCGGTTATATTGATCCTGAATTTCAAAGATGTGGACAATTAAATAAGGAAAGTGACATTTATAGTTTTGGAATGATTCTTCTTCAACTAATAACTGGTCATCCTCCAATAAAGAGAGGTCCTAGGAATATTACTTTCATTCTTGATTGGGTTCAACCTAAAATTGAATGCGGCGATATTAAAGGCATTGTTGATCCAAGATTAGCAAGAGAATTCTATGTTACTTCAATATGGAAAGTTGTTGAAGTAGCAATGTTATGTGTCTTACCAACACCATCCCAAAGGCCAAACATAAGTTACATATTACAAGAACTACAAGAATGTTTGGCTTTGGAGATGGATCATGCAAGAATAGATAACACAATGCCCAGCAGCAGTTTACTAGATTATAGTGTGAATATTGAATCAATGACTATTCTCTCTGCTAGGTAG 2535 0.3874 MILWILALYVLLSFIIAGHSAPVATYGGHSGFISIDCGASEGYVDELTRIPYQTDKGFIESGTNHEVGLKSSRFPYIQRQLQTLRSFPDGKRNCYTLKPKQEMNQKQKYMIRAIFAYQNYDYTSQPPTFALHLGVNYWTTIDKDDPSLTYREIIIQLTNGTVQVCLVHIGQGTPFINTLELRPLNNSLYAAPFPLSFRVRRDCRIETKNWARYKDDVYDRLWYRHVNPDLVLLKAQVKVVENSTYELPSEILLTACQSPNKSNILNERVPVSLKLDKQHYFFLHFAEIQKLPSGKKRILNVTIDDEYSLSQKLTLDYLKPVTLHFNKIVTTIYAHLTVRATADSYAPPIINAFEIFEVIPEPESPTNAKDVYAIMEIKRAYGISKISWQGDPCVPYNLAWEGVHCSSGNNTRIISLDLSNNELRGELPEFLASLPNLKFINVTGNKLRGSIPKALKENANLNISAAENPGLCRRDSCDHINKFVIPLSTSIGVLVLIAILSSMIWRLKKKRQDLSTKSLILKQKNREFSYSQVVDITNNFKTLIGEGGFGKVYLGTLEDGSQVAVKLLSASSKQGYKEFQSEAQLLTVIHHRNLVSLVGYCHEGNIKALIYEYVDNGDLGHLLEKNSKVLKWNERLQVAIDTAKGLEYLHVGCHTPIIHRDLKPSNILLNKFMVAKIADFGLSRAFINEGDSHLSTQPAGTPGYIDPEFQRCGQLNKESDIYSFGMILLQLITGHPPIKRGPRNITFILDWVQPKIECGDIKGIVDPRLAREFYVTSIWKVVEVAMLCVLPTPSQRPNISYILQELQECLALEMDHARIDNTMPSSSLLDYSVNIESMTILSAR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1432 844 Pfam Protein tyrosine and serine/threonine kinase 540 806 IPR001245 GO:0004672|GO:0006468
Prci8g1432 844 SUPERFAMILY Protein kinase-like (PK-like) 522 806 IPR011009 -
Prci8g1432 844 SUPERFAMILY L domain-like 395 461 - -
Prci8g1432 844 SMART serkin_6 538 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1432 844 Gene3D Phosphorylase Kinase; domain 1 520 613 - -
Prci8g1432 844 ProSitePatterns Protein kinases ATP-binding region signature. 544 566 IPR017441 GO:0005524
Prci8g1432 844 Gene3D Ribonuclease Inhibitor 370 492 IPR032675 -
Prci8g1432 844 Pfam Malectin-like domain 35 358 IPR024788 -
Prci8g1432 844 FunFam Leucine-rich repeat receptor-like protein kinase 516 613 - -
Prci8g1432 844 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 614 819 - -
Prci8g1432 844 ProSiteProfiles Protein kinase domain profile. 538 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1432 844 CDD STKc_IRAK 544 808 - -
Prci8g1432 844 PANTHER OS07G0107800 PROTEIN-RELATED 33 810 - -
Prci8g1432 844 Gene3D Transferase(Phosphotransferase) domain 1 614 825 - -
Prci8g1432 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1432 Prci-Chr8 11156228 11164750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1432 29 811 Receptor kinase-like Gene Family AT2G19230 41.475 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci8g1432 Malectin_like 2.5e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1432 - - pcin:129289942 956.051