Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1431 ATGATACTGTGGATTCTGGCTTTGTATGTGTTGTTATCTTTCATCATCGCTGGTCACTCAGCACCAGTTGCTACATATGGTGGTCATTCAGGTTTCATAAGCATAGATTGTGGAGCAAGCGAAGGTTATGTCGACGAACTAACTAGGATTCCCTACCAGACAGATAAAGGCTTCATAGAAAGCGGAACCAATCATGAAGTAGGCCTCAAATCCAGTCGTTTTCCATACATACAAAGACAGCTACAGACACTGCGAAGTTTTCCAGATGGAAAACGAAACTGTTACACTCTGAAACCAAAACAAGAGATGAATCAGAAGCAAAAGTACATGATCAGGGCTATCTTCGCATATCAGAACTACGACTACACAAGCCAACCTCCAACGTTTGCACTCCACCTGGGGGTCAATTATTGGACCACAATTGATAAAGATGATCCCTCTCTCACATATCGTGAAATCATAATCCAACTTACCAATGGCACTGTGCAAGTGTGTCTGGTACACATAGGACAAGGCACACCTTTCATCAACACTTTGGAATTAAGGCCACTGAACAACTCTCTTTATGCAGCGCCATTTCCATTATCTTTTCGAGTAAGGAGAGATTGTCGCATTGAGACTAAAAATTGGGCCAGGTACAAGGACGATGTGTATGATCGCTTGTGGTATCGACATGTTAATCCTGATTTGGTTCTCTTGAAAGCGCAAGTAAAAGTAGTCGAAAACTCTACTTATGAGCTACCATCAGAAATATTACTCACAGCATGTCAATCTCCAAATAAGTCCAATATCTTAAATGAAAGAGTGCCTAAACTTACTCTTGACTACTTGAAACCTGTCACCCTACATTTCAACAAGATAGTTACTACAATCTATGCTCACCTCACAGTCAGAGCAACTGCTGATTCTTATGCTCCTCCTATCATCAATGCCTTTGAGATCTTCGAAGTCATTCCAGAACCAGAGTCTCCTACCAATGCAAAAGATGTTTATGCCATCATGGAGATCAAGCGTGCCTATGGTATCTCCAAAATCAGTTGGCAAGGGGACCCTTGTGTGCCATATAACTTGGCATGGGAAGGTGTGCATTGCAGCTCGGGCAACAACACAAGAATCATTTCGTTGAACCTGAGCTCAAGCAAACTAACAAAAGAAATCGTTAAGTCATTCGTGGATTTGGAAAAATTGGAATCCTTGGATTTGTCCAACAATGAATTAAGGGGAGAATTACCAGAATTTCTCGCAAGTCTTCCTAATTTGAAATTCATTAATGTGACTGGAAACAAGCTGAGAGGTTCAATACCCAAGGCGTTGAAGGAAAATGCTAATTTGAATATCAGTGCAGCCGAGAATCCAGGCCTCTGTAGGAGAGATTCATGTGACCACATAAACAAGTTTGTTATTCCTCTTAGTACATCAATTGGAGTTTTAGTCCTAATTGCCATTCTCTCTTCGATGATTTGGAGACTCAAAAAGAAAAGACAAGATCTGTCAACCAAGTCCCTAATTCTAAAACAGAAGAATCGAGAATTTTCTTACTCACAAGTTGTTGATATCACCAACAATTTCAAAACTCTTATTGGAGAAGGAGGGTTTGGGAAAGTTTACCTTGGTACTTTAGAAGATGGTTCTCAAGTTGCAGTTAAATTGCTTTCTGCATCATCAAAGCAAGGATACAAGGAATTTCAATCTGAGGCTCAACTCCTAACTGTTATTCATCATCGAAACTTAGTTTCACTTGTTGGGTATTGTCATGAGGGCAACATCAAGGCATTGATTTATGAATATGTGGATAATGGGGACCTTGGCCATCTCTTAGAGAAAAACTCAAAAGTTTTGAAGTGGAATGAGAGACTTCAAGTTGCAATTGACACAGCAAAAGGATTGGAATATCTTCATGTTGGTTGTCATACTCCTATAATTCATAGAGACTTGAAACCATCCAATATTTTATTAAATAAATTCATGGTGGCCAAGATTGCTGATTTTGGACTATCTAGAGCCTTTATAAATGAAGGAGATTCTCATCTATCAACTCAACCTGCTGGTACTCCCGGTTATATTGATCCTGAATTTCAAAGATGTGGACAATTAAATAAGGAAAGTGACATTTATAGTTTTGGAATGATTCTTCTTCAACTAATAACTGGTCATCCTCCAATAAAGAGAGGTCCTAGGAATATTACTTTCATTCTTGATTGGGTTCAACCTAAAATTGAATGCGGCGATATTAAAGGCATTGTTGATCCAAGATTAGCAAGAGAATTCTATGTTACTTCAATATGGAAAGTTGTTGAAGTAGCAATGTTATGTGTCTTACCAACACCATCCCAAAGGCCAAACATAAGTTACATATTACAAGAACTACAAGAATGTTTGGCTTTGGAGATGGATCATGCAAGAATAGATAACACAATGCCCAGCAGCAGTTTACTAGATTATAGTGTGAATATTGAATCAATGACTATTCTCTCTGCTAGGTAG 2484 0.3889 MILWILALYVLLSFIIAGHSAPVATYGGHSGFISIDCGASEGYVDELTRIPYQTDKGFIESGTNHEVGLKSSRFPYIQRQLQTLRSFPDGKRNCYTLKPKQEMNQKQKYMIRAIFAYQNYDYTSQPPTFALHLGVNYWTTIDKDDPSLTYREIIIQLTNGTVQVCLVHIGQGTPFINTLELRPLNNSLYAAPFPLSFRVRRDCRIETKNWARYKDDVYDRLWYRHVNPDLVLLKAQVKVVENSTYELPSEILLTACQSPNKSNILNERVPKLTLDYLKPVTLHFNKIVTTIYAHLTVRATADSYAPPIINAFEIFEVIPEPESPTNAKDVYAIMEIKRAYGISKISWQGDPCVPYNLAWEGVHCSSGNNTRIISLNLSSSKLTKEIVKSFVDLEKLESLDLSNNELRGELPEFLASLPNLKFINVTGNKLRGSIPKALKENANLNISAAENPGLCRRDSCDHINKFVIPLSTSIGVLVLIAILSSMIWRLKKKRQDLSTKSLILKQKNREFSYSQVVDITNNFKTLIGEGGFGKVYLGTLEDGSQVAVKLLSASSKQGYKEFQSEAQLLTVIHHRNLVSLVGYCHEGNIKALIYEYVDNGDLGHLLEKNSKVLKWNERLQVAIDTAKGLEYLHVGCHTPIIHRDLKPSNILLNKFMVAKIADFGLSRAFINEGDSHLSTQPAGTPGYIDPEFQRCGQLNKESDIYSFGMILLQLITGHPPIKRGPRNITFILDWVQPKIECGDIKGIVDPRLAREFYVTSIWKVVEVAMLCVLPTPSQRPNISYILQELQECLALEMDHARIDNTMPSSSLLDYSVNIESMTILSAR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1431 827 SMART serkin_6 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1431 827 Gene3D Transferase(Phosphotransferase) domain 1 597 808 - -
Prci8g1431 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Prci8g1431 827 PANTHER OS07G0107800 PROTEIN-RELATED 33 797 - -
Prci8g1431 827 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Prci8g1431 827 Gene3D Phosphorylase Kinase; domain 1 503 596 - -
Prci8g1431 827 ProSiteProfiles Protein kinase domain profile. 521 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1431 827 FunFam Leucine-rich repeat receptor-like kinase 328 457 - -
Prci8g1431 827 Gene3D Ribonuclease Inhibitor 332 454 IPR032675 -
Prci8g1431 827 FunFam Leucine-rich repeat receptor-like protein kinase 499 596 - -
Prci8g1431 827 SUPERFAMILY L domain-like 354 444 - -
Prci8g1431 827 ProSiteProfiles Leucine-rich repeat profile. 395 418 IPR001611 GO:0005515
Prci8g1431 827 SUPERFAMILY Protein kinase-like (PK-like) 505 789 IPR011009 -
Prci8g1431 827 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 597 802 - -
Prci8g1431 827 CDD STKc_IRAK 527 791 - -
Prci8g1431 827 Pfam Leucine rich repeat 374 430 IPR001611 GO:0005515
Prci8g1431 827 Pfam Malectin-like domain 35 290 IPR024788 -
Prci8g1431 827 Pfam Protein tyrosine and serine/threonine kinase 523 789 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1431 Prci-Chr8 11156228 11164750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1431 29 793 Receptor kinase-like Gene Family AT2G19230 41.626 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci8g1431 PK_Tyr_Ser-Thr 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1431 - - pcin:129289942 931.398