Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1430 ATGGGTGGTAGGGGTACTGAACCTGAAGCTGAAGATTGCATATCCAAGCAGTGTTCCAAATCACTGAGCCTTTCAGTGGAGGATCATGTCTCCAGCGGATCCATGAATTTTGAAGCTCTTATTGGAGAAGGAGGATTTGGGAAGGTTTACCTTGGCACTTTAGAAGATGATTCTCACGTTGCAGTCAAATTACTTTCTGCACCATCAAAGGAAGGATATAAGGAATTCCAATCAGAGGCTCAACTCTTGACAGTTATTCACCGTAGAAACTTGGTTTCGCTTGTTGGGTATTGCAATGAAAACAACATCATGGCCTTGATTTATGAATATTTGGATAACGATAAAAACTCAAAGGTTTTGAAGTGGAATAAGAGACTTCAAGTTGCAATTGATACAGCAAAAGGACTAGAATATCTTCATACTGGTTGCAGCACTCCTATAATCCATAGAGACTTGAAACCATCCAACATTTTATTAAATAAATCCATGGTAGCAAAAATTGCTGATTTTGGACTATCTAGAGCATTTATAAATGAAGGAGATACTCATCTATTAACTCAATCAGCTAGCACTCCTGGTTATATTGATCTTGAATTTCAAATATCTGGACAACTTAACAAGAAAAGTGATGTTTATAGTTTTGGAATGATTCTTCTTCAACTAATAACCGGTCATCCTCCAATAAAGAGAGGACCTGAGAATATTATTAGATTTATTCTTGATTGGATTCAACCTAAAATTGAATGTGGGAATATTGAAGGCATTGTTGATCCAAGATTAGCTGGAGAATTCCATGTAATTAGTTCAACATGGAAAGTTATTGAAGTGGCAATGTCATCTGTGTTACCAATGCCATCCCAAAGACCAGATATAAGTTAG 879 0.3663 MGGRGTEPEAEDCISKQCSKSLSLSVEDHVSSGSMNFEALIGEGGFGKVYLGTLEDDSHVAVKLLSAPSKEGYKEFQSEAQLLTVIHRRNLVSLVGYCNENNIMALIYEYLDNDKNSKVLKWNKRLQVAIDTAKGLEYLHTGCSTPIIHRDLKPSNILLNKSMVAKIADFGLSRAFINEGDTHLLTQSASTPGYIDLEFQISGQLNKKSDVYSFGMILLQLITGHPPIKRGPENIIRFILDWIQPKIECGNIEGIVDPRLAGEFHVISSTWKVIEVAMSSVLPMPSQRPDIS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1430 292 Pfam Protein kinase domain 38 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1430 292 ProSitePatterns Protein kinases ATP-binding region signature. 41 63 IPR017441 GO:0005524
Prci8g1430 292 ProSiteProfiles Protein kinase domain profile. 35 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1430 292 SMART serkin_6 35 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1430 292 Gene3D Phosphorylase Kinase; domain 1 41 109 - -
Prci8g1430 292 PANTHER OS07G0107800 PROTEIN-RELATED 34 292 - -
Prci8g1430 292 FunFam Os07g0541700 protein 102 191 - -
Prci8g1430 292 SUPERFAMILY Protein kinase-like (PK-like) 26 291 IPR011009 -
Prci8g1430 292 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Prci8g1430 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Prci8g1430 292 FunFam receptor-like protein kinase FERONIA 6 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1430 Prci-Chr8 11125282 11131876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1430 36 291 Receptor kinase-like Gene Family AT1G51890 47.170 1.13e-81 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci8g1430 Pkinase 1.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1430 - - pcin:129317292 585.489