LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci8g1429	ATGAAGAGCCCGATACTCTGGATTCTGGCTTTGTATGTGTTGGTTTCCTTCATTATTACTACTCACTCAGCACAAGTTGTTGCAGATGTTGGTAACTCAGGTTTCATAAGCATAGACTGTGGAGCAAGCAAAGATTACGTTGATGAAGAAACAGGGATTTGGTACGAGACAGATGAAGGCTTCATAGAAACTGGAACCAATCATGAAGTGTCCCCCAGTTTTGCAATCTCCAATTTTCCATACCTACAACGACAGCTAAACACGCTAAGAAGTTTCCCTCAGGGAAAAAGAAACTGTTATACTTTGAAACCAAAACAAGAGGATGATGAGAATCACAAGTACAGGTACATTATCAGAGTTATGTTTGCATATCAAAATTATGACTACAAAAACGACATACCCAAGTTCGATCTCTACTTAGGGGTTAGTTTTTGGCAGACAGTTCGATTGCCTTCGACAAATTCTTTCCACTATTATGAATTAACAATCCCACAGCTTACCAATGGCATGGTACAAGTGTGTCTTGTAGAAACCGGAGAAGGCATACCTTTCATTAACACTTTGGAATTAAGACCACTGAACAACTCTCTCTATTCCTCTCCATTTCCCTTGTCTCCCCAAAGGACAGATTGTGGCTACGGGCCTGCTATTGATAGGTTCAGGTACGAAGACGATGTGTACGATCGCTTGTGGCCAAGATATGACTATAAGGATCCCATTTGGGATGTCTTGAGAACTACAGGTGCACAAGTCAGAATAGAAAACTCCACTTATAAGCTACCATCAGAAGTATTACTCACAGCATGTCAACCCCAGAACAATTCCAATCTCTTAACTGCAAATTGGAGTTTTAATGTAGCCAGACAATATTATTTGTACCTTCATTTCGCTGAAATCCAAAAGCTTCCTTCTGGCAAAAAGAGGATTATCAATGTCACTTTTGATGATGAAAATTCGCCCTCTCAGGAACTTGCTCTTGAATACTTGAAACCAGTAACCCTAATTTCCAACTTGATAAGTAGTAGGAGTTATGTTAGCTTCACAGTCAGAGCAACGGTTGATTCTTATGCTCCTCCTATCCTCAATGCCTTTGAGATTCTTAATGTCTTCCCACTGCCAAACTCCCCTACAGATGCACGAGACGTTAATGCCATCATGAGAATCAAGCTTACTTATGGCATCTCAAAAATTAGTTGGCAAGGCGACCCATGCGTGCCATCTGCCTTTGCATGGGAAGGTGTGAATTGTAGCTCTGGCAACAATACAAGAATCGTTTCACTGAACCTGAGCTCAAGCAAACTAACAAGAGCAATAGTTAAGTCGTTCGCCGATTTGGAAAAATTGGAGTCCTTGGATTTGTCGAATAACGAATTGACAGGAGAATTACCAGAATTTCTTGCAAGTCTTCCTAATTTGAAATTCATTAATGTGACTGGAAACAAGCTCACCGGTCCGATTCCGACGGCTTTAAAGGAAAATGCTAAATTGAATATCAGTGCGGCCAACAATCCAGGCCTTTGTGAGAGAGATTCATGTGACCAAGAAAAAAAGTTTGTAATTCCTCTTACTACATCAATTGGAGTTTTAGTCCTTATAGCCATTCTTTCTTCGATGATTTGGAGACTCAGAAGAGACACAAGACAAGATCTGTCAACAGAATCCCCGAAAATGGAAATTCTAAAACAAAAGAATCGAGAGTTCTCTTACTCACAAGTTCTTGATATCACCGACAATCTCAAAACACTTATTGGCGAAGGAGGGTTTGGGAAAGTTTACCTTGGTACTTTGGAAGATGGTTCTCAAGTTGCAGTCAAATTACTTTCTCCCTCATCAAAGCAAGGATACAAGGAATTTCAATCTGAGGCTCAACTCCTAGCGGTTATTCATCATAGAAACTTAGTTTCACTTGTTGGGTATTGTTATGAGAACAACATAAAGGCATTGATTTATGAATATGTGGATAATGGGGACCTTCGCCAACTCTTAGAGAAGAACTCAAATGTTTTGAAGTGGAATCAGAGACTTCAAGTTGCAATTGACACTGCAAAAGGATTGGAATATCTTCATACTGGTTGCCATACTCCTATAATTCATAGAGACTTGAAGCCGTCCAACATTTTATTAAATAAATTTATGGTAGCCAAGATTGCTGATTTTGGACTATCCAGAGCCTTTACAAACGAAGGAGATTCCTATCTATCAACTCAACCTGCTGGTACTCTGGGTTATATTGATCCTGAATTCCAAAGATCTGGACAACTAAATAAGGAAAGTGATATTTATAGTTTTGGAATGATTCTTCTTCAGCTAATAACTGGCCGTCCTCCGATAAAGAGATCAGGTCCTAGGACTAATACTTTCATTCTTGATTGGATTCAACCTAAAATTGAATGTGGAGATATTCAAGGCATTGTTGATCCAAGACTAGCTAGAGAATTCTATGTTACATCAACCTCGAAAGCTATTGAAGTAGCAATGTCATGTGTCCTACCAACACCATCCCAAAGGCCAGAAATAAGTTATATATTGCAAGAACTACAAGAATGTTTAGCTTTGGAGATGGATCATACAAGAATAGATAACACTATTTGA	2592	0.3924	MKSPILWILALYVLVSFIITTHSAQVVADVGNSGFISIDCGASKDYVDEETGIWYETDEGFIETGTNHEVSPSFAISNFPYLQRQLNTLRSFPQGKRNCYTLKPKQEDDENHKYRYIIRVMFAYQNYDYKNDIPKFDLYLGVSFWQTVRLPSTNSFHYYELTIPQLTNGMVQVCLVETGEGIPFINTLELRPLNNSLYSSPFPLSPQRTDCGYGPAIDRFRYEDDVYDRLWPRYDYKDPIWDVLRTTGAQVRIENSTYKLPSEVLLTACQPQNNSNLLTANWSFNVARQYYLYLHFAEIQKLPSGKKRIINVTFDDENSPSQELALEYLKPVTLISNLISSRSYVSFTVRATVDSYAPPILNAFEILNVFPLPNSPTDARDVNAIMRIKLTYGISKISWQGDPCVPSAFAWEGVNCSSGNNTRIVSLNLSSSKLTRAIVKSFADLEKLESLDLSNNELTGELPEFLASLPNLKFINVTGNKLTGPIPTALKENAKLNISAANNPGLCERDSCDQEKKFVIPLTTSIGVLVLIAILSSMIWRLRRDTRQDLSTESPKMEILKQKNREFSYSQVLDITDNLKTLIGEGGFGKVYLGTLEDGSQVAVKLLSPSSKQGYKEFQSEAQLLAVIHHRNLVSLVGYCYENNIKALIYEYVDNGDLRQLLEKNSNVLKWNQRLQVAIDTAKGLEYLHTGCHTPIIHRDLKPSNILLNKFMVAKIADFGLSRAFTNEGDSYLSTQPAGTLGYIDPEFQRSGQLNKESDIYSFGMILLQLITGRPPIKRSGPRTNTFILDWIQPKIECGDIQGIVDPRLAREFYVTSTSKAIEVAMSCVLPTPSQRPEISYILQELQECLALEMDHTRIDNTI	863

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci8g1429	863	ProSitePatterns	Protein kinases ATP-binding region signature.	583	605	IPR017441	GO:0005524
	Prci8g1429	863	Pfam	Protein kinase domain	580	844	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci8g1429	863	SMART	serkin_6	577	850	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci8g1429	863	SUPERFAMILY	L domain-like	407	496	-	-
	Prci8g1429	863	Pfam	Malectin-like domain	38	368	IPR024788	-
	Prci8g1429	863	Gene3D	Ribonuclease Inhibitor	387	505	IPR032675	-
	Prci8g1429	863	ProSiteProfiles	Leucine-rich repeat profile.	447	470	IPR001611	GO:0005515
	Prci8g1429	863	Gene3D	Phosphorylase Kinase; domain 1	549	652	-	-
	Prci8g1429	863	PANTHER	OS07G0107800 PROTEIN-RELATED	36	850	-	-
	Prci8g1429	863	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	653	859	-	-
	Prci8g1429	863	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	696	708	IPR008271	GO:0004672\|GO:0006468
	Prci8g1429	863	Pfam	Leucine rich repeat	424	482	IPR001611	GO:0005515
	Prci8g1429	863	FunFam	Leucine-rich repeat receptor-like protein kinase	555	652	-	-
	Prci8g1429	863	FunFam	Leucine-rich repeat receptor-like kinase	380	508	-	-
	Prci8g1429	863	ProSiteProfiles	Protein kinase domain profile.	577	859	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci8g1429	863	Gene3D	Transferase(Phosphotransferase) domain 1	653	861	-	-
	Prci8g1429	863	CDD	STKc_IRAK	583	848	-	-
	Prci8g1429	863	SUPERFAMILY	Protein kinase-like (PK-like)	558	846	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci8g1429	Prci-Chr8	11110020	11119548	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci8g1429	14	851	Receptor kinase-like Gene Family	AT2G19230	41.928	0.0	615

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Prci8g1429		Malectin_like	1.1e-80	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci8g1429	-		-	pcin:129289942	1035.79