Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1428 ATGAAGAGCCCGATACTCTGGATTCTGGCTTTGTATGTGTTGGTTTCCTTCATTATTACTACTCACTCAGCACAAGTTGTTGCAGATGTTGGTAACTCAGGTTTCATAAGCATAGACTGTGGAGCAAGCAAAGATTACGTTGATGAAGAAACAGGGATTTGGTACGAGACAGATGAAGGCTTCATAGAAACTGGAACCAATCATGAAGTGTCCCCCAGTTTTGCAATCTCCAATTTTCCATACCTACAACGACAGCTAAACACGCTAAGAAGTTTCCCTCAGGGAAAAAGAAACTGTTATACTTTGAAACCAAAACAAGAGGATGATGAGAATCACAAGTACAGGTACATTATCAGAGTTATGTTTGCATATCAAAATTATGACTACAAAAACGACATACCCAAGTTCGATCTCTACTTAGGGGTTAGTTTTTGGCAGACAGTTCGATTGCCTTCGACAAATTCTTTCCACTATTATGAATTAACAATCCCACAGCTTACCAATGGCATGGTACAAGTGTGTCTTGTAGAAACCGGAGAAGGCATACCTTTCATTAACACTTTGGAATTAAGACCACTGAACAACTCTCTCTATTCCTCTCCATTTCCCTTGTCTCCCCAAAGGACAGATTGTGGCTACGGGCCTGCTATTGATAGGTTCAGGTACGAAGACGATGTGTACGATCGCTTGTGGCCAAGATATGACTATAAGGATCCCATTTGGGATGTCTTGAGAACTACAGGTGCACAAGTCAGAATAGAAAACTCCACTTATAAGCTACCATCAGAAGTATTACTCACAGCATGTCAACCCCAGAACAATTCCAATCTCTTAACTGCAAATTGGAGTTTTAATGTAGCCAGACAATATTATTTGTACCTTCATTTCGCTGAAATCCAAAAGCTTCCTTCTGGCAAAAAGAGGATTATCAATGTCACTTTTGATGATGAAAATTCGCCCTCTCAGGAACTTGCTCTTGAATACTTGAAACCAGTAACCCTAATTTCCAACTTGATAAGTAGTAGGAGTTATGTTAGCTTCACAGTCAGAGCAACGGTTGATTCTTATGCTCCTCCTATCCTCAATGCCTTTGAGATTCTTAATGTCTTCCCACTGCCAAACTCCCCTACAGATGCACGAGACGTTAATGCCATCATGAGAATCAAGCTTACTTATGGCATCTCAAAAATTAGTTGGCAAGGCGACCCATGCGTGCCATCTGCCTTTGCATGGGAAGGTGTGAATTGTAGCTCTGGCAACAATACAAGAATCGTTTCACTTAATGTGACTGGAAACAAGCTCACCGGTCCGATTCCGACGGCTTTAAAGGAAAATGCTAAATTGAATATCAGTGCGGCCAACAATCCAGGCCTTTGTGAGAGAGATTCATGTGACCAAGAAAAAAAGTTTGTAATTCCTCTTACTACATCAATTGGAGTTTTAGTCCTTATAGCCATTCTTTCTTCGATGATTTGGAGACTCAGAAGAGACACAAGACAAGATCTGTCAACAGAATCCCCGAAAATGGAAATTCTAAAACAAAAGAATCGAGAGTTCTCTTACTCACAAGTTCTTGATATCACCGACAATCTCAAAACACTTATTGGCGAAGGAGGGTTTGGGAAAGTTTACCTTGGTACTTTGGAAGATGGTTCTCAAGTTGCAGTCAAATTACTTTCTCCCTCATCAAAGCAAGGATACAAGGAATTTCAATCTGAGGCTCAACTCCTAGCGGTTATTCATCATAGAAACTTAGTTTCACTTGTTGGGTATTGTTATGAGAACAACATAAAGGCATTGATTTATGAATATGTGGATAATGGGGACCTTCGCCAACTCTTAGAGAAGAACTCAAATGTTTTGAAGTGGAATCAGAGACTTCAAGTTGCAATTGACACTGCAAAAGGATTGGAATATCTTCATACTGGTTGCCATACTCCTATAATTCATAGAGACTTGAAGCCGTCCAACATTTTATTAAATAAATTTATGGTAGCCAAGATTGCTGATTTTGGACTATCCAGAGCCTTTACAAACGAAGGAGATTCCTATCTATCAACTCAACCTGCTGGTACTCTGGGTTATATTGATCCTGAATTCCAAAGATCTGGACAACTAAATAAGGAAAGTGATATTTATAGTTTTGGAATGATTCTTCTTCAGCTAATAACTGGCCGTCCTCCGATAAAGAGATCAGGTCCTAGGACTAATACTTTCATTCTTGATTGGATTCAACCTAAAATTGAATGTGGAGATATTCAAGGCATTGTTGATCCAAGACTAGCTAGAGAATTCTATGTTACATCAACCTCGAAAGCTATTGAAGTAGCAATGTCATGTGTCCTACCAACACCATCCCAAAGGCCAGAAATAAGTTATATATTGCAAGAACTACAAGAATGTTTAGCTTTGGAGATGGATCATACAAGAATAGATAACACTATTTGA 2448 0.3934 MKSPILWILALYVLVSFIITTHSAQVVADVGNSGFISIDCGASKDYVDEETGIWYETDEGFIETGTNHEVSPSFAISNFPYLQRQLNTLRSFPQGKRNCYTLKPKQEDDENHKYRYIIRVMFAYQNYDYKNDIPKFDLYLGVSFWQTVRLPSTNSFHYYELTIPQLTNGMVQVCLVETGEGIPFINTLELRPLNNSLYSSPFPLSPQRTDCGYGPAIDRFRYEDDVYDRLWPRYDYKDPIWDVLRTTGAQVRIENSTYKLPSEVLLTACQPQNNSNLLTANWSFNVARQYYLYLHFAEIQKLPSGKKRIINVTFDDENSPSQELALEYLKPVTLISNLISSRSYVSFTVRATVDSYAPPILNAFEILNVFPLPNSPTDARDVNAIMRIKLTYGISKISWQGDPCVPSAFAWEGVNCSSGNNTRIVSLNVTGNKLTGPIPTALKENAKLNISAANNPGLCERDSCDQEKKFVIPLTTSIGVLVLIAILSSMIWRLRRDTRQDLSTESPKMEILKQKNREFSYSQVLDITDNLKTLIGEGGFGKVYLGTLEDGSQVAVKLLSPSSKQGYKEFQSEAQLLAVIHHRNLVSLVGYCYENNIKALIYEYVDNGDLRQLLEKNSNVLKWNQRLQVAIDTAKGLEYLHTGCHTPIIHRDLKPSNILLNKFMVAKIADFGLSRAFTNEGDSYLSTQPAGTLGYIDPEFQRSGQLNKESDIYSFGMILLQLITGRPPIKRSGPRTNTFILDWIQPKIECGDIQGIVDPRLAREFYVTSTSKAIEVAMSCVLPTPSQRPEISYILQELQECLALEMDHTRIDNTI 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1428 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Prci8g1428 815 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Prci8g1428 815 Pfam Protein kinase domain 532 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1428 815 SUPERFAMILY Protein kinase-like (PK-like) 510 798 IPR011009 -
Prci8g1428 815 SMART serkin_6 529 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1428 815 Gene3D Ribonuclease Inhibitor 381 479 IPR032675 -
Prci8g1428 815 Gene3D Phosphorylase Kinase; domain 1 501 604 - -
Prci8g1428 815 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 605 811 - -
Prci8g1428 815 Gene3D Transferase(Phosphotransferase) domain 1 605 813 - -
Prci8g1428 815 ProSiteProfiles Protein kinase domain profile. 529 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1428 815 FunFam Leucine-rich repeat receptor-like protein kinase 507 604 - -
Prci8g1428 815 PANTHER OS07G0107800 PROTEIN-RELATED 36 802 - -
Prci8g1428 815 Pfam Malectin-like domain 38 368 IPR024788 -
Prci8g1428 815 CDD STKc_IRAK 535 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1428 Prci-Chr8 11110020 11119548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1428 14 803 Receptor kinase-like Gene Family AT2G19230 39.024 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci8g1428 Malectin_like 9.3e-81 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1428 - - pcin:129289942 952.199