Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1427 ATGAAGAGCCCGATACTCTGGATTCTGGCTTTGTATGTGTTGGTTTCCTTCATTATTACTACTCACTCAGCACAAGTTGTTGCAGATGTTGGTAACTCAGGTTTCATAAGCATAGACTGTGGAGCAAGCAAAGATTACGTTGATGAAGAAACAGGGATTTGGTACGAGACAGATGAAGGCTTCATAGAAACTGGAACCAATCATGAAGTGTCCCCCAGTTTTGCAATCTCCAATTTTCCATACCTACAACGACAGCTAAACACGCTAAGAAGTTTCCCTCAGGGAAAAAGAAACTGTTATACTTTGAAACCAAAACAAGAGGATGATGAGAATCACAAGTACAGGTACATTATCAGAGTTATGTTTGCATATCAAAATTATGACTACAAAAACGACATACCCAAGTTCGATCTCTACTTAGGGGTTAGTTTTTGGCAGACAGTTCGATTGCCTTCGACAAATTCTTTCCACTATTATGAATTAACAATCCCACAGCTTACCAATGGCATGGTACAAGTGTGTCTTGTAGAAACCGGAGAAGGCATACCTTTCATTAACACTTTGGAATTAAGACCACTGAACAACTCTCTCTATTCCTCTCCATTTCCCTTGTCTCCCCAAAGGACAGATTGTGGCTACGGGCCTGCTATTGATAGGTTCAGGTACGAAGACGATGTGTACGATCGCTTGTGGCCAAGATATGACTATAAGGATCCCATTTGGGATGTCTTGAGAACTACAGGTGCACAAGTCAGAATAGAAAACTCCACTTATAAGCTACCATCAGAAGTATTACTCACAGCATGTCAACCCCAGAACAATTCCAATCTCTTAACTGCAAATTGGAGTTTTAATGTAGCCAGACAATATTATTTGTACCTTCATTTCGCTGAAATCCAAAAGCTTCCTTCTGGCAAAAAGAGGATTATCAATGTCACTTTTGATGATGAAAATTCGCCCTCTCAGGAACTTGCTCTTGAATACTTGAAACCAGTAACCCTAATTTCCAACTTGATAAGTAGTAGGAGTTATGTTAGCTTCACAGTCAGAGCAACGGTTGATTCTTATGCTCCTCCTATCCTCAATGCCTTTGAGATTCTTAATGTCTTCCCACTGCCAAACTCCCCTACAGATGCACGAGACGTTAATGCCATCATGAGAATCAAGCTTACTTATGGCATCTCAAAAATTAGTTGGCAAGGCGACCCATGCGTGCCATCTGCCTTTGCATGGGAAGGTGTGAATTGTAGCTCTGGCAACAATACAAGAATCGTTTCACTTGCGGCCAACAATCCAGGCCTTTGTGAGAGAGATTCATGTGACCAAGAAAAAAAGTTTGTAATTCCTCTTACTACATCAATTGGAGTTTTAGTCCTTATAGCCATTCTTTCTTCGATGATTTGGAGACTCAGAAGAGACACAAGACAAGATCTGTCAACAGAATCCCCGAAAATGGAAATTCTAAAACAAAAGAATCGAGAGTTCTCTTACTCACAAGTTCTTGATATCACCGACAATCTCAAAACACTTATTGGCGAAGGAGGGTTTGGGAAAGTTTACCTTGGTACTTTGGAAGATGGTTCTCAAGTTGCAGTCAAATTACTTTCTCCCTCATCAAAGCAAGGATACAAGGAATTTCAATCTGAGGCTCAACTCCTAGCGGTTATTCATCATAGAAACTTAGTTTCACTTGTTGGGTATTGTTATGAGAACAACATAAAGGCATTGATTTATGAATATGTGGATAATGGGGACCTTCGCCAACTCTTAGAGAAGAACTCAAATGTTTTGAAGTGGAATCAGAGACTTCAAGTTGCAATTGACACTGCAAAAGGATTGGAATATCTTCATACTGGTTGCCATACTCCTATAATTCATAGAGACTTGAAGCCGTCCAACATTTTATTAAATAAATTTATGGTAGCCAAGATTGCTGATTTTGGACTATCCAGAGCCTTTACAAACGAAGGAGATTCCTATCTATCAACTCAACCTGCTGGTACTCTGGGTTATATTGATCCTGAATTCCAAAGATCTGGACAACTAAATAAGGAAAGTGATATTTATAGTTTTGGAATGATTCTTCTTCAGCTAATAACTGGCCGTCCTCCGATAAAGAGATCAGGTCCTAGGACTAATACTTTCATTCTTGATTGGATTCAACCTAAAATTGAATGTGGAGATATTCAAGGCATTGTTGATCCAAGACTAGCTAGAGAATTCTATGTTACATCAACCTCGAAAGCTATTGAAGTAGCAATGTCATGTGTCCTACCAACACCATCCCAAAGGCCAGAAATAAGTTATATATTGCAAGAACTACAAGAATGTTTAGCTTTGGAGATGGATCATACAAGAATAGATAACACTATTTGA 2376 0.3927 MKSPILWILALYVLVSFIITTHSAQVVADVGNSGFISIDCGASKDYVDEETGIWYETDEGFIETGTNHEVSPSFAISNFPYLQRQLNTLRSFPQGKRNCYTLKPKQEDDENHKYRYIIRVMFAYQNYDYKNDIPKFDLYLGVSFWQTVRLPSTNSFHYYELTIPQLTNGMVQVCLVETGEGIPFINTLELRPLNNSLYSSPFPLSPQRTDCGYGPAIDRFRYEDDVYDRLWPRYDYKDPIWDVLRTTGAQVRIENSTYKLPSEVLLTACQPQNNSNLLTANWSFNVARQYYLYLHFAEIQKLPSGKKRIINVTFDDENSPSQELALEYLKPVTLISNLISSRSYVSFTVRATVDSYAPPILNAFEILNVFPLPNSPTDARDVNAIMRIKLTYGISKISWQGDPCVPSAFAWEGVNCSSGNNTRIVSLAANNPGLCERDSCDQEKKFVIPLTTSIGVLVLIAILSSMIWRLRRDTRQDLSTESPKMEILKQKNREFSYSQVLDITDNLKTLIGEGGFGKVYLGTLEDGSQVAVKLLSPSSKQGYKEFQSEAQLLAVIHHRNLVSLVGYCYENNIKALIYEYVDNGDLRQLLEKNSNVLKWNQRLQVAIDTAKGLEYLHTGCHTPIIHRDLKPSNILLNKFMVAKIADFGLSRAFTNEGDSYLSTQPAGTLGYIDPEFQRSGQLNKESDIYSFGMILLQLITGRPPIKRSGPRTNTFILDWIQPKIECGDIQGIVDPRLAREFYVTSTSKAIEVAMSCVLPTPSQRPEISYILQELQECLALEMDHTRIDNTI 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1427 791 Pfam Malectin-like domain 38 368 IPR024788 -
Prci8g1427 791 Pfam Protein kinase domain 508 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1427 791 PANTHER OS07G0107800 PROTEIN-RELATED 441 778 - -
Prci8g1427 791 CDD STKc_IRAK 511 776 - -
Prci8g1427 791 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Prci8g1427 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Prci8g1427 791 ProSiteProfiles Protein kinase domain profile. 505 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1427 791 SUPERFAMILY Protein kinase-like (PK-like) 486 774 IPR011009 -
Prci8g1427 791 FunFam Leucine-rich repeat receptor-like protein kinase 483 580 - -
Prci8g1427 791 Gene3D Transferase(Phosphotransferase) domain 1 581 789 - -
Prci8g1427 791 SMART serkin_6 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1427 791 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 581 787 - -
Prci8g1427 791 Gene3D Phosphorylase Kinase; domain 1 477 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1427 Prci-Chr8 11110020 11119548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1427 26 780 Receptor kinase-like Gene Family AT2G14510 35.833 8.92e-157 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci8g1427 Malectin_like 8.7e-81 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1427 - - pcin:129289942 845.114