Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1415 ATGACAGAGGTAGTTATCGCAGTTGCTGCCAAAGTCTCAGAATATTTGGTGGGTCCTGCTATTCATCTTGGATATTACTTGTTTTGTGTTGGCAAACTCACCAGAAAGCTTAAGAAAGAGAAGGAGAAGCTGATATCAAGAAAAGATGATGTGACTCGGCGTGCAGAGGAAGCAGAGAAGAGAACTGAGAAGATTGAACCTGCAGTGGAGAAGTGGTTGCAAGAAGTACAAAGTTTGCTACAAGATGTGGAGAATGATCTGAAGAAATTAAAGAGAGCCAATGGTCACTTCTGTGAATTTTGTCCAAGTTGGAGAAGATATAGATTGAGCAAGCAATTAGAGAAGAAGATACAAAGAATGATTGAGCTCAACAACAACAGCACATTTGAGAAATTTTCTCGTCTTGCTTCCCTTCCAACAAATATTACCTCCACAACAGATATTATGTTCTTTGAATCCAATCAATGGGCTTTTGATAAACTTTTGGAGGCATTGAAGGACGACAACTGTCACATAATATGCTTAGATGGGATGGGGGGATGTGGCAAAACAACCCTTGCAAAAGAAGTCGGCAAAAGAGCTCTAGAATTTAAACTCTTTGATAAAGTTGTTTTCACTGTTGTGTCCCAAACCATTACTGTTGGCAAGGTGCAAGATGACATTGCTGATGTATTGGGTTTGAGTCCTTGGCAAGAAGCAAGTAAGGATGGGAGGGCAAAACGATTATCATTGGGATTCCAAAATGGGGGCAGAATTCTTGTTATATTGGATGATGTTTGGAGAGAGTTGAATCTTGAAGACTTTGGTATCCCTTCAGATGGCAACCTTAAAGGTTGCAAAATCCTTTTAACTACACGTGTCCGTGATCTTTGTTCTTTGATGAATGGTCAAAAGAATGTTTCACTGGATCTCTTATCACCACAAGAAGCATGGGTTTTCCTTCAAAAGAAAGCAGGTATAGCTGAGGACTCTTCATTAAATAGTGTGGCGCAAGAGGTTGCTGCTGAATGCGGAGGACTGCCCATAGCAATTCAAGCTATCGCAACAACTTTGAAAGCAAAGCCTCTTGATAGTTGGAAAGATGCTTTATATAAACTAAAGCACTCCGAACCTATTGAAGTTCATTTGGATGACAAAGATGCTTTTAAATGCATTCAATATAGTTATGATGTTTTGAGGAGTGAAAAAGCACGTCGTCTTTTCTTGATGTGTTGTATTTTTCCAGAAGATCATGAGATCAAAAGAGAAGACCTTTTCTTATATGGAGTGGGGTTGGGCTTGTTCGGGGAAAATGGTTCATTTGATGATTTAAGGAGCAGAGTGAATGCAACTTTAGATCATCTCCTTGATTATTCTTTGTTGATGAATTCTGATATAGGAGATGGTTGCTTCAAAATCCATGATGTTGTACTTGATTTTGCTAAATGGAAGGCATCCCAAGAGGATTGGTTTGTCATTGTTGATCATGAGAAGGGGATAAATTCCTTGGCATTGGATGGGACTGCAAAAACCTGTTCTGCAATATCTACATGGGACATTGAAGAGGATCAATTTCCTCAACAATTTGACTACCCAAAGCTTGAGATTCTATTGCTCAATTCAACTAATTCCTTGGATTTGTCTCAAGCATCATTTGAAGGCATCAAAGGAGTCAAAGTTATGGCCTTGATTAAACAATTTTATCATGTGACGCCTTTGTCATTGCCACAATCAACCAACTGGTTGACTAATCTTCAAACCTTACGTTTGGTGGGATATGATTTAGGTGACATCTCATTTGTGATTCATTTAAAAAGACTTGTGATTCTTGATTTGCATTGGAGTACTTTCAAGTCATTGCCAGAAGGAATAGAAGAATTGAAAAAATTGAAGATGCTAGATCTAAGGGAGTGCTCCATTATTGAAAATTTTGATGAAGTGATTGGAAGGTGCTCGCAACTTGAAGAATTATATGTGTGTGGAGATAGAGCATTTGTTGGAAAAAATGTTGATTCTCAAGCATCCCTTTTGGAGGGCGCTTCTTTTCAAAAATTGTGTAGGTATGAATTACAAATGGGGAATATAGAAGATGATTCCAATTTCCGAGTAGAAAGATATCGATCATGTCTATACTTTGGAGAGTTATATACATCCAACATAAGTACAAGTGTCAAGAATTTGATAGCGAAAGCCGAAGGCATTCATTTGCAAAACCTTCATGGAGGCTGCAAAAGTATCTTCCCAGAATTTGTTGAAGTTGTGGGAATCATGACTAGTCTGATTGAATTGGTTCTTTTTGATTGTCACGAGATCGAGTTCTTCATTTGTTTAACTCCAACCCAAGTTTCTCGTTTCCATTTTGATAGGGTGTTCTCGATGTTGGTCAAGTTGAGACTATACAATATGAACAATCTCAAACATGTGTGTTGTGGTTCTCTTCCGCCGAACATTTTTCAAAAATTGGAACAAGTGGATATATGGGAATGCCTTCATTTGATCAGTATATTTCCTGAGGAGTGCAATCTTCAGAACTTGCGGGAACTTGACATCCAGGGATGTCCAATGTTGACATCACTCTTTTCAATGTCAGTTGCTCAATCTCTATCCCAATTAGAAGAAATAACAATAAAAAGATGTTCAAACTTGAGGCATATAATAATGAATGATGAACATAATGCCACGGATGGAAGGCAAGAAATATTTCAAGCATCAGAATGTTTGAATTCCATGTTCCCCAAATTGATGAGCTTGACTGTAGAAGGTTGTGACAATCTGGAATATGTGCTTCCAATTTATTGTGCTCAAGGCCTCTCGCAACTGCAAAGGATAAACATTGCAAATGCTTCTCTGATGAAGTATGTATTTGGCAGGCATGTTACTGGGGGTCTTTCAACCAATCAGAATGAGATACAAATTGTGCTTCCACAACTACAAAAGATGGTTCTTGAGCACCTCATGAGTCTCGTCAGCATCTGTCCAGAAAATTATTTTCCAAATTTGTCATCCTTAAAGGAAATTACATGGACGAATTGTCCCAAGTTGGCAAATATGGGATTACTTGGAGTTAGAGATGAATGTGAAATGAGTAATGAAGTGCTTCAAAAACCACAGGGTTCAAGAGTGTTTTCCAAAGCTTCAAATCATAACACTGCGTGGATGTGGAAAGTTGAACTGTGTCTTTCCCACAATCGTCGGCAGCAACTTGCCAAATCTGATACGTCTTCGCATAGAAAACTGTGA 3219 0.3849 MTEVVIAVAAKVSEYLVGPAIHLGYYLFCVGKLTRKLKKEKEKLISRKDDVTRRAEEAEKRTEKIEPAVEKWLQEVQSLLQDVENDLKKLKRANGHFCEFCPSWRRYRLSKQLEKKIQRMIELNNNSTFEKFSRLASLPTNITSTTDIMFFESNQWAFDKLLEALKDDNCHIICLDGMGGCGKTTLAKEVGKRALEFKLFDKVVFTVVSQTITVGKVQDDIADVLGLSPWQEASKDGRAKRLSLGFQNGGRILVILDDVWRELNLEDFGIPSDGNLKGCKILLTTRVRDLCSLMNGQKNVSLDLLSPQEAWVFLQKKAGIAEDSSLNSVAQEVAAECGGLPIAIQAIATTLKAKPLDSWKDALYKLKHSEPIEVHLDDKDAFKCIQYSYDVLRSEKARRLFLMCCIFPEDHEIKREDLFLYGVGLGLFGENGSFDDLRSRVNATLDHLLDYSLLMNSDIGDGCFKIHDVVLDFAKWKASQEDWFVIVDHEKGINSLALDGTAKTCSAISTWDIEEDQFPQQFDYPKLEILLLNSTNSLDLSQASFEGIKGVKVMALIKQFYHVTPLSLPQSTNWLTNLQTLRLVGYDLGDISFVIHLKRLVILDLHWSTFKSLPEGIEELKKLKMLDLRECSIIENFDEVIGRCSQLEELYVCGDRAFVGKNVDSQASLLEGASFQKLCRYELQMGNIEDDSNFRVERYRSCLYFGELYTSNISTSVKNLIAKAEGIHLQNLHGGCKSIFPEFVEVVGIMTSLIELVLFDCHEIEFFICLTPTQVSRFHFDRVFSMLVKLRLYNMNNLKHVCCGSLPPNIFQKLEQVDIWECLHLISIFPEECNLQNLRELDIQGCPMLTSLFSMSVAQSLSQLEEITIKRCSNLRHIIMNDEHNATDGRQEIFQASECLNSMFPKLMSLTVEGCDNLEYVLPIYCAQGLSQLQRINIANASLMKYVFGRHVTGGLSTNQNEIQIVLPQLQKMVLEHLMSLVSICPENYFPNLSSLKEITWTNCPKLANMGLLGVRDECEMSNEVLQKPQGSRVFSKASNHNTAWMWKVELCLSHNRRQQLAKSDTSSHRKL 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1415 1072 Coils Coil 73 93 - -
Prci8g1415 1072 Gene3D - 388 478 IPR036388 -
Prci8g1415 1072 Pfam NB-ARC domain 158 390 IPR002182 GO:0043531
Prci8g1415 1072 Coils Coil 34 61 - -
Prci8g1415 1072 Gene3D - 305 387 IPR042197 -
Prci8g1415 1072 FunFam Probable disease resistance protein At1g61300 142 299 - -
Prci8g1415 1072 PRINTS Disease resistance protein signature 172 187 - -
Prci8g1415 1072 PRINTS Disease resistance protein signature 246 260 - -
Prci8g1415 1072 PRINTS Disease resistance protein signature 618 634 - -
Prci8g1415 1072 PRINTS Disease resistance protein signature 337 351 - -
Prci8g1415 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 404 IPR027417 -
Prci8g1415 1072 Gene3D Ribonuclease Inhibitor 491 656 IPR032675 -
Prci8g1415 1072 SUPERFAMILY L domain-like 466 1008 - -
Prci8g1415 1072 Gene3D Ribonuclease Inhibitor 658 1048 IPR032675 -
Prci8g1415 1072 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 921 - -
Prci8g1415 1072 Gene3D - 130 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1415 Prci-Chr8 10846833 10854386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1415 158 641 WRKY Transcription Factor Family AT5G45050 23.800 4.22e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1415 - - pcin:129317587 1066.99