Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1413 ATGTATCAGGAAATATCATTTGTTGAAATGACAGAGGTAGTTATCGCAGTTGCTGCCAAAGTCTCAGAATATTTGGTGGGTCCTGCTATTCATCTTGGATATTACTTGTTTTGTGTTGGCAAACTCACCAGAAAGCTTAAGAAAGAGAAGGAGAAGCTGATATCAAGAAAAGATGATGTGACTCGGCGTGCAGAGGAAGCAGAGAAGAGAACTGAGAAGATTGAACCTGCAGTGGAGAAGTGGTTGCAAGAAGTACAAAGTTTGCTACAAGATGTGGAGAATGATCTGAAGAAATTAAAGAGAGCCAATGGTCACTTCTGTGAATTTTGTCCAAGTTGGAGAAGATATAGATTGAGCAAGCAATTAGAGAAGAAGATACAAAGAATGATTGAGCTCAACAACAACAGCACATTTGAGAAATTTTCTCGTCTTGCTTCCCTTCCAACAAATATTACCTCCACAACAGATATTATGTTCTTTGAATCCAATCAATGGGCTTTTGATAAACTTTTGGAGGCATTGAAGGACGACAACTGTCACATAATATGCTTAGATGGGATGGGGGGATGTGGCAAAACAACCCTTGCAAAAGAAGTCGGCAAAAGAGCTCTAGAATTTAAACTCTTTGATAAAGTTGTTTTCACTGTTGTGTCCCAAACCATTACTGTTGGCAAGGTGCAAGATGACATTGCTGATGTATTGGGTTTGAGTCCTTGGCAAGAAGCAAGTAAGGATGGGAGGGCAAAACGATTATCATTGGGATTCCAAAATGGGGGCAGAATTCTTGTTATATTGGATGATGTTTGGAGAGAGTTGAATCTTGAAGACTTTGGTATCCCTTCAGATGGCAACCTTAAAGGTTGCAAAATCCTTTTAACTACACGTGTCCGTGATCTTTGTTCTTTGATGAATGGTCAAAAGAATGTTTCACTGGATCTCTTATCACCACAAGAAGCATGGGTTTTCCTTCAAAAGAAAGCAGGTATAGCTGAGGACTCTTCATTAAATAGTGTGGCGCAAGAGGTTGCTGCTGAATGCGGAGGACTGCCCATAGCAATTCAAGCTATCGCAACAACTTTGAAAGCAAAGCCTCTTGATAGTTGGAAAGATGCTTTATATAAACTAAAGCACTCCGAACCTATTGAAGTTCATTTGGATGACAAAGATGCTTTTAAATGCATTCAATATAGTTATGATGTTTTGAGGAGTGAAAAAGCACGTCGTCTTTTCTTGATGTGTTGTATTTTTCCAGAAGATCATGAGATCAAAAGAGAAGACCTTTTCTTATATGGAGTGGGGTTGGGCTTGTTCGGGGAAAATGGTTCATTTGATGATTTAAGGAGCAGAGTGAATGCAACTTTAGATCATCTCCTTGATTATTCTTTGTTGATGAATTCTGATATAGGAGATGGTTGCTTCAAAATCCATGATGTTGTACTTGATTTTGCTAAATGGAAGGCATCCCAAGAGGATTGGTTTGTCATTGTTGATCATGAGAAGGGGATAAATTCCTTGGCATTGGATGGGACTGCAAAAACCTGTTCTGCAATATCTACATGGGACATTGAAGAGGATCAATTTCCTCAACAATTTGACTACCCAAAGCTTGAGATTCTATTGCTCAATTCAACTAATTCCTTGGATTTGTCTCAAGCATCATTTGAAGGCATCAAAGGAGTCAAAGTTATGGCCTTGATTAAACAATTTTATCATGTGACGCCTTTGTCATTGCCACAATCAACCAACTGGTTGACTAATCTTCAAACCTTACGTTTGGTGGGATATGATTTAGGTGACATCTCATTTGTGATTCATTTAAAAAGACTTGTGATTCTTGATTTGCATTGGAGTACTTTCAAGTCATTGCCAGAAGGAATAGAAGAATTGAAAAAATTGAAGATGCTAGATCTAAGGGAGTGCTCCATTATTGAAAATTTTGATGAAGTGATTGGAAGGTGCTCGCAACTTGAAGAATTATATGTGTGTGGAGATAGAGCATTTGTTGGAAAAAATGTTGATTCTCAAGCATCCCTTTTGGAGGGCGCTTCTTTTCAAAAATTGTGTAGGTATGAATTACAAATGGGGAATATAGAAGATGATTCCAATTTCCGAGTAGAAAGATATCGATCATGTCTATACTTTGGAGAGTTATATACATCCAACATAAGTACAAGTGTCAAGAATTTGATAGCGAAAGCCGAAGGCATTCATTTGCAAAACCTTCATGGAGGCTGCAAAAGTATCTTCCCAGAATTTGTTGAAGTTGTGGGAATCATGACTAGTCTGATTGAATTGGTTCTTTTTGATTGTCACGAGATCGAGTTCTTCATTTGTTTAACTCCAACCCAAGTTTCTCGTTTCCATTTTGATAGGGTGTTCTCGATGTTGGTCAAGTTGAGACTATACAATATGAACAATCTCAAACATGTGTGTTGTGGTTCTCTTCCGCCGAACATTTTTCAAAAATTGGAACAAGTGGATATATGGGAATGCCTTCATTTGATCAGTATATTTCCTGAGGAGTGCAATCTTCAGAACTTGCGGGAACTTGACATCCAGGGATGTCCAATGTTGACATCACTCTTTTCAATGTCAGTTGCTCAATCTCTATCCCAATTAGAAGAAATAACAATAAAAAGATGTTCAAACTTGAGGCATATAATAATGAATGATGAACATAATGCCACGGATGGAAGGCAAGAAATATTTCAAGCATCAGAATGTTTGAATTCCATGTTCCCCAAATTGATGAGCTTGACTGTAGAAGGTTGTGACAATCTGGAATATGTGCTTCCAATTTATTGTGCTCAAGGCCTCTCGCAACTGCAAAGGATAAACATTGCAAATGCTTCTCTGATGAAGTATGTATTTGGCAGGCATGTTACTGGGGGTCTTTCAACCAATCAGAATGAGATACAAATTGTGCTTCCACAACTACAAAAGATGGTTCTTGAGCACCTCATGAGTCTCGTCAGCATCTGTCCAGAAAATTATTTTCCAAATTTGTCATCCTTAAAGGAAATTACATGGACGAATTGTCCCAAGTTGGCAAATATGGGATTACTTGGAGTTAGAGATGAATGTGAAATGAGTAATGAAGTGCTTCAAAAACCACAGGGTTCAAGAGTGTTTTCCAAAGCTTCAAATCATAACACTGCGTGGATGTGGAAAGTTGAACTGTGTCTTTCCCACAATCGTCGGCAGCAACTTGCCAAATCTGATACGTCTTCGCATAGAAAACTGTGA 3246 0.3839 MYQEISFVEMTEVVIAVAAKVSEYLVGPAIHLGYYLFCVGKLTRKLKKEKEKLISRKDDVTRRAEEAEKRTEKIEPAVEKWLQEVQSLLQDVENDLKKLKRANGHFCEFCPSWRRYRLSKQLEKKIQRMIELNNNSTFEKFSRLASLPTNITSTTDIMFFESNQWAFDKLLEALKDDNCHIICLDGMGGCGKTTLAKEVGKRALEFKLFDKVVFTVVSQTITVGKVQDDIADVLGLSPWQEASKDGRAKRLSLGFQNGGRILVILDDVWRELNLEDFGIPSDGNLKGCKILLTTRVRDLCSLMNGQKNVSLDLLSPQEAWVFLQKKAGIAEDSSLNSVAQEVAAECGGLPIAIQAIATTLKAKPLDSWKDALYKLKHSEPIEVHLDDKDAFKCIQYSYDVLRSEKARRLFLMCCIFPEDHEIKREDLFLYGVGLGLFGENGSFDDLRSRVNATLDHLLDYSLLMNSDIGDGCFKIHDVVLDFAKWKASQEDWFVIVDHEKGINSLALDGTAKTCSAISTWDIEEDQFPQQFDYPKLEILLLNSTNSLDLSQASFEGIKGVKVMALIKQFYHVTPLSLPQSTNWLTNLQTLRLVGYDLGDISFVIHLKRLVILDLHWSTFKSLPEGIEELKKLKMLDLRECSIIENFDEVIGRCSQLEELYVCGDRAFVGKNVDSQASLLEGASFQKLCRYELQMGNIEDDSNFRVERYRSCLYFGELYTSNISTSVKNLIAKAEGIHLQNLHGGCKSIFPEFVEVVGIMTSLIELVLFDCHEIEFFICLTPTQVSRFHFDRVFSMLVKLRLYNMNNLKHVCCGSLPPNIFQKLEQVDIWECLHLISIFPEECNLQNLRELDIQGCPMLTSLFSMSVAQSLSQLEEITIKRCSNLRHIIMNDEHNATDGRQEIFQASECLNSMFPKLMSLTVEGCDNLEYVLPIYCAQGLSQLQRINIANASLMKYVFGRHVTGGLSTNQNEIQIVLPQLQKMVLEHLMSLVSICPENYFPNLSSLKEITWTNCPKLANMGLLGVRDECEMSNEVLQKPQGSRVFSKASNHNTAWMWKVELCLSHNRRQQLAKSDTSSHRKL 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1413 1081 Gene3D Ribonuclease Inhibitor 503 681 IPR032675 -
Prci8g1413 1081 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 38 930 - -
Prci8g1413 1081 Gene3D - 314 396 IPR042197 -
Prci8g1413 1081 FunFam Probable disease resistance protein At1g61300 151 308 - -
Prci8g1413 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 413 IPR027417 -
Prci8g1413 1081 Coils Coil 43 70 - -
Prci8g1413 1081 Gene3D Ribonuclease Inhibitor 714 897 IPR032675 -
Prci8g1413 1081 Pfam NB-ARC domain 167 399 IPR002182 GO:0043531
Prci8g1413 1081 Gene3D - 397 487 IPR036388 -
Prci8g1413 1081 Gene3D - 139 310 IPR027417 -
Prci8g1413 1081 PRINTS Disease resistance protein signature 627 643 - -
Prci8g1413 1081 PRINTS Disease resistance protein signature 181 196 - -
Prci8g1413 1081 PRINTS Disease resistance protein signature 255 269 - -
Prci8g1413 1081 PRINTS Disease resistance protein signature 346 360 - -
Prci8g1413 1081 Gene3D Ribonuclease Inhibitor 901 1022 IPR032675 -
Prci8g1413 1081 SUPERFAMILY L domain-like 475 1017 - -
Prci8g1413 1081 Coils Coil 82 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1413 Prci-Chr8 10846833 10854386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1413 167 650 WRKY Transcription Factor Family AT5G45050 23.800 4.38e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1413 - - pcin:129317587 1066.99