Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1412 ATGTATCAGGAAATATCATTTGTTGAAATGACAGAGGTAGTTATCGCAGTTGCTGCCAAAGTCTCAGAATATTTGGTGGGTCCTGCTATTCATCTTGGATATTACTTGTTTTGTGTTGGCAAACTCACCAGAAAGCTTAAGAAAGAGAAGGAGAAGCTGATATCAAGAAAAGATGATGTGACTCGGCGTGCAGAGGAAGCAGAGAAGAGAACTGAGAAGATTGAACCTGCAGTGGAGAAGTGGTTGCAAGAAGTACAAAGTTTGCTACAAGATGTGGAGAATGATCTGAAGAAATTAAAGAGAGCCAATGGTCACTTCTGTGAATTTTGTCCAAGTTGGAGAAGATATAGATTGAGCAAGCAATTAGAGAAGAAGATACAAAGAATGATTGAGCTCAACAACAACAGCACATTTGAGAAATTTTCTCGTCTTGCTTCCCTTCCAACAAATATTACCTCCACAACAGATATTATGTTCTTTGAATCCAATCAATGGGCTTTTGATAAACTTTTGGAGGCATTGAAGGACGACAACTGTCACATAATATGCTTAGATGGGATGGGGGGATGTGGCAAAACAACCCTTGCAAAAGAAGTCGGCAAAAGAGCTCTAGAATTTAAACTCTTTGATAAAGTTGTTTTCACTGTTGTGTCCCAAACCATTACTGTTGGCAAGGTGCAAGATGACATTGCTGATGTATTGGGTTTGAGTCCTTGGCAAGAAGCAAGTAAGGATGGGAGGGCAAAACGATTATCATTGGGATTCCAAAATGGGGGCAGAATTCTTGTTATATTGGATGATGTTTGGAGAGAGTTGAATCTTGAAGACTTTGGTATCCCTTCAGATGGCAACCTTAAAGGTTGCAAAATCCTTTTAACTACACGTGTCCGTGATCTTTGTTCTTTGATGAATGGTCAAAAGAATGTTTCACTGGATCTCTTATCACCACAAGAAGCATGGGTTTTCCTTCAAAAGAAAGCAGGTATAGCTGAGGACTCTTCATTAAATAGTGTGGCGCAAGAGGTTGCTGCTGAATGCGGAGGACTGCCCATAGCAATTCAAGCTATCGCAACAACTTTGAAAGCAAAGCCTCTTGATAGTTGGAAAGATGCTTTATATAAACTAAAGCACTCCGAACCTATTGAAGTTCATTTGGATGACAAAGATGCTTTTAAATGCATTCAATATAGTTATGATGTTTTGAGGAGTGAAAAAGCACGTCGTCTTTTCTTGATGTGTTGTATTTTTCCAGAAGATCATGAGATCAAAAGAGAAGACCTTTTCTTATATGGAGTGGGGTTGGGCTTGTTCGGGGAAAATGGTTCATTTGATGATTTAAGGAGCAGAGTGAATGCAACTTTAGATCATCTCCTTGATTATTCTTTGTTGATGAATTCTGATATAGGAGATGGTTGCTTCAAAATCCATGATGTTGTACTTGATTTTGCTAAATGGAAGGCATCCCAAGAGGATTGGTTTGTCATTGTTGATCATGAGAAGGGGATAAATTCCTTGGCATTGGATGGGACTGCAAAAACCTGTTCTGCAATATCTACATGGGACATTGAAGAGGATCAATTTCCTCAACAATTTGACTACCCAAAGCTTGAGATTCTATTGCTCAATTCAACTAATTCCTTGGATTTGTCTCAAGCATCATTTGAAGGCATCAAAGGAGTCAAAGTTATGGCCTTGATTAAACAATTTTATCATGTGACGCCTTTGTCATTGCCACAATCAACCAACTGGTTGACTAATCTTCAAACCTTACGTTTGGTGGGATATGATTTAGGTGACATCTCATTTGTGATTCATTTAAAAAGACTTGTGATTCTTGATTTGCATTGGAGTACTTTCAAGTCATTGCCAGAAGGAATAGAAGAATTGAAAAAATTGAAGATGCTAGATCTAAGGGAGTGCTCCATTATTGAAAATTTTGATGAAGTGATTGGAAGGTGCTCGCAACTTGAAGAATTATATGTGTGTGGAGATAGAGCATTTGTTGGAAAAAATGTTGATTCTCAAGCATCCCTTTTGGAGGGCGCTTCTTTTCAAAAATTGTGTAGGTATGAATTACAAATGGGGAATATAGAAGATGATTCCAATTTCCGAGTAGAAAGATATCGATCATGTCTATACTTTGGAGAGTTATATACATCCAACATAAGTACAAGTGTCAAGAATTTGATAGCGAAAGCCGAAGGCATTCATTTGCAAAACCTTCATGGAGGCTGCAAAAGTATCTTCCCAGAATTTGTTGAAGTTGTGGGAATCATGACTAGTCTGATTGAATTGGTTCTTTTTGATTGTCACGAGATCGAGTTCTTCATTTGTTTAACTCCAACCCAAGTTTCTCGTTTCCATTTTGATAGGGTGTTCTCGATGTTGGTCAAGTTGAGACTATACAATATGAACAATCTCAAACATGTGTGTTGTGGTTCTCTTCCGCCGAACATTTTTCAAAAATTGGAACAAGTGGATATATGGGAATGCCTTCATTTGATCAGTATATTTCCTGAGGAGTGCAATCTTCAGAACTTGCGGGAACTTGACATCCAGGGATGTCCAATGTTGACATCACTCTTTTCAATGTCAGTTGCTCAATCTCTATCCCAATTAGAAGAAATAACAATAAAAAGATGTTCAAACTTGAGGCATATAATAATGAATGATGAACATAATGCCACGGATGGAAGGCAAGAAATATTTCAAGCATCAGAATGTTTGAATTCCATGTTCCCCAAATTGATGAGCTTGACTGTAGAAGGTTGTGACAATCTGGAATATGTGCTTCCAATTTATTGTGCTCAAGGCCTCTCGCAACTGCAAAGGATAAACATTGCAAATGCTTCTCTGATGAAGTATGTATTTGGCAGGCATGTTACTGGGGGTCTTTCAACCAATCAGAATGAGATACAAATTGTGCTTCCACAACTACAAAAGATGGTTCTTGAGCACCTCATGAGTCTCGTCAGCATCTGTCCAGAAAATTATTTTCCAAATTTGTCATCCTTAAAGGAAATTACATGGACGAATTGTCCCAAGTTGGCAAATATGGGATTACTTGGAGTTATAATGAATGTGAAATGA 3090 0.3812 MYQEISFVEMTEVVIAVAAKVSEYLVGPAIHLGYYLFCVGKLTRKLKKEKEKLISRKDDVTRRAEEAEKRTEKIEPAVEKWLQEVQSLLQDVENDLKKLKRANGHFCEFCPSWRRYRLSKQLEKKIQRMIELNNNSTFEKFSRLASLPTNITSTTDIMFFESNQWAFDKLLEALKDDNCHIICLDGMGGCGKTTLAKEVGKRALEFKLFDKVVFTVVSQTITVGKVQDDIADVLGLSPWQEASKDGRAKRLSLGFQNGGRILVILDDVWRELNLEDFGIPSDGNLKGCKILLTTRVRDLCSLMNGQKNVSLDLLSPQEAWVFLQKKAGIAEDSSLNSVAQEVAAECGGLPIAIQAIATTLKAKPLDSWKDALYKLKHSEPIEVHLDDKDAFKCIQYSYDVLRSEKARRLFLMCCIFPEDHEIKREDLFLYGVGLGLFGENGSFDDLRSRVNATLDHLLDYSLLMNSDIGDGCFKIHDVVLDFAKWKASQEDWFVIVDHEKGINSLALDGTAKTCSAISTWDIEEDQFPQQFDYPKLEILLLNSTNSLDLSQASFEGIKGVKVMALIKQFYHVTPLSLPQSTNWLTNLQTLRLVGYDLGDISFVIHLKRLVILDLHWSTFKSLPEGIEELKKLKMLDLRECSIIENFDEVIGRCSQLEELYVCGDRAFVGKNVDSQASLLEGASFQKLCRYELQMGNIEDDSNFRVERYRSCLYFGELYTSNISTSVKNLIAKAEGIHLQNLHGGCKSIFPEFVEVVGIMTSLIELVLFDCHEIEFFICLTPTQVSRFHFDRVFSMLVKLRLYNMNNLKHVCCGSLPPNIFQKLEQVDIWECLHLISIFPEECNLQNLRELDIQGCPMLTSLFSMSVAQSLSQLEEITIKRCSNLRHIIMNDEHNATDGRQEIFQASECLNSMFPKLMSLTVEGCDNLEYVLPIYCAQGLSQLQRINIANASLMKYVFGRHVTGGLSTNQNEIQIVLPQLQKMVLEHLMSLVSICPENYFPNLSSLKEITWTNCPKLANMGLLGVIMNVK 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1412 1029 Pfam NB-ARC domain 167 399 IPR002182 GO:0043531
Prci8g1412 1029 Gene3D - 139 310 IPR027417 -
Prci8g1412 1029 PRINTS Disease resistance protein signature 255 269 - -
Prci8g1412 1029 PRINTS Disease resistance protein signature 346 360 - -
Prci8g1412 1029 PRINTS Disease resistance protein signature 181 196 - -
Prci8g1412 1029 PRINTS Disease resistance protein signature 627 643 - -
Prci8g1412 1029 Gene3D - 314 396 IPR042197 -
Prci8g1412 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 413 IPR027417 -
Prci8g1412 1029 Coils Coil 43 70 - -
Prci8g1412 1029 Gene3D Ribonuclease Inhibitor 506 687 IPR032675 -
Prci8g1412 1029 FunFam Probable disease resistance protein At1g61300 151 308 - -
Prci8g1412 1029 Gene3D - 397 487 IPR036388 -
Prci8g1412 1029 Gene3D Ribonuclease Inhibitor 711 1022 IPR032675 -
Prci8g1412 1029 SUPERFAMILY L domain-like 475 1017 - -
Prci8g1412 1029 Coils Coil 82 102 - -
Prci8g1412 1029 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 38 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1412 Prci-Chr8 10846833 10865620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1412 186 650 WRKY Transcription Factor Family AT5G45050 23.340 5.78e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1412 - - pcin:129317587 1066.99