Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1397 ATGGCGTCCAAGAGTTTTCAAATAGGAAAAGAGCAAAGTCGTAATGAACCGAGGCTAGAACTTAAGGGGTCTGAGCTGGGTCTACAGCAGTCTGAGCTAGGTCAAGATGAGCCAAATTTTGAAAAACTCGAGCCAAATCCAAACAACATCCTCATGGATCTTCCAACCATCTCCCTCTTCAACAATTCCTCACCCGCCACCGGAAACTTCATCTCTGGCGCCGGCGAACCCACCACCGGCAACAACCAAATTCTCCGGCCAGCAAAAAGGCCAGTCGGAAGACCCAAGGGTTCAAAGAACAAGCGTCAGGTAGTATCACCACCGCTGGGGAGCCAATCTCTGAACTCCACTGCCGTCATCGGAATCCCCACCGGCGAAGCTACTGACAACAACCATATTCTCCGGCCGCCAAAACGGCCTGTGGGAAGACCCAAGGGTTCCAAGAACCAGGCCAAGACACCCACCACACCGTTCAAGATTGAAGAATCTCAAAACTCGACAACGGCCGTCATCGAAATCCCAGCCGGCGCCAACGTGGAACAGTCGCTCCTTCAGTTCTGTCTCCGGCGTCAAGTCTCCATCACCGTCTTAACGGCCTTCGGTCAACTTTCCAACATCATCACCTGCCACCAACCAATACAAACCATCCTCGGACCCTTCCCGATCCTGTCACTTTCCGGCACCGTCAACCCAATCCCACCGTCTGGTTCCATGAACTCGCCGGAGAGTAATTTCCCGTTGACGGTTCTTCTTTCTTTGCCGAACGGTCTTACCATCGGCGGAATAGTGGGAAAGGTTGCGACGGCAGCGAGCAAGGTGAAGGTGGTGGCTATTCCGACGACGGTACAAAACAACGCAACGTTTGAGACTCTGCGCGTCGACGATATTCAGGCTAATAATAGTCACGTACGTAGAAATTACACCGCTCAGCAATTTACCTGCGCAGAATCATCAGTTCAGTGA 963 0.5234 MASKSFQIGKEQSRNEPRLELKGSELGLQQSELGQDEPNFEKLEPNPNNILMDLPTISLFNNSSPATGNFISGAGEPTTGNNQILRPAKRPVGRPKGSKNKRQVVSPPLGSQSLNSTAVIGIPTGEATDNNHILRPPKRPVGRPKGSKNQAKTPTTPFKIEESQNSTTAVIEIPAGANVEQSLLQFCLRRQVSITVLTAFGQLSNIITCHQPIQTILGPFPILSLSGTVNPIPPSGSMNSPESNFPLTVLLSLPNGLTIGGIVGKVATAASKVKVVAIPTTVQNNATFETLRVDDIQANNSHVRRNYTAQQFTCAESSVQ 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1397 320 Pfam Plants and Prokaryotes Conserved (PCC) domain 168 278 IPR005175 -
Prci8g1397 320 MobiDBLite consensus disorder prediction 68 156 - -
Prci8g1397 320 Gene3D - 168 302 - -
Prci8g1397 320 MobiDBLite consensus disorder prediction 68 85 - -
Prci8g1397 320 SUPERFAMILY AF0104/ALDC/Ptd012-like 165 279 - -
Prci8g1397 320 ProSiteProfiles PPC domain profile profile. 162 304 IPR005175 -
Prci8g1397 320 CDD DUF296 170 270 IPR005175 -
Prci8g1397 320 MobiDBLite consensus disorder prediction 1 48 - -
Prci8g1397 320 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 132 302 IPR014476 GO:0003680
Prci8g1397 320 MobiDBLite consensus disorder prediction 104 124 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1397 138 301 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.721 4.36e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1397 - - pcin:129317286 617.076