Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1395 ATGACTTCAGTTGTGAAGATCGAAGGCCAACAGCTCCCCGTCAACGATTTTCAGGATTTGTCCCTCAAAGATAAGAGTGAAATGCGATGCGAAGCAGAGATCCTCCAGGTGGGATCTGAGAACCATGGGGGAATCTGTGCGATTTGCTTGGATAAGATAGTACTGCAGGAAACTGCGCTCGTTAAAGGTTGCGAGCATGCTTACTGTGTAACATGCATTCTTCAGTGGGCGACACATTGTCCGAGGGCCACTTGCCCGCAATGTAAACATCCATTTGAGTTTCTTAATGTCCATCGCTCCCTTGATGGCGGCCTTCATGACTACATGTTTGAGGAAAGTGTCTGCCTACTTCTCCGAGCTTCATGGTTTAAACCTTTAAATGTGGAAGATCGTGCTGAGCATGAAGACATATATATGTACGATGACATTGAGGATTATTTTGAATACGACGATGGGCAAGATGACTTAGATGAAGCTTATTATGGTGGCTCATCAAGCATCCGCATCGGCAACCGGAGATGGGGAGACAATGGCTATGTTAGGGCTGGTCGACAACAAGCTAGGCCAGTGTACCAACCACACTCCCAGAACTCGGGGGCAAGTTCATCCCGTGAGCCAAGGAACAAAGAGGTTGTCAAAGGTGCTACAACAACTGGACGGCGAGCAAAGCGAGCACTGAAACGGGAGGAGGCGGATAAGGCTGCTGCGGCGAAGCATCAGCAGCATCTAGTTAGGTTGGGAAGGAAGTGA 750 0.488 MTSVVKIEGQQLPVNDFQDLSLKDKSEMRCEAEILQVGSENHGGICAICLDKIVLQETALVKGCEHAYCVTCILQWATHCPRATCPQCKHPFEFLNVHRSLDGGLHDYMFEESVCLLLRASWFKPLNVEDRAEHEDIYMYDDIEDYFEYDDGQDDLDEAYYGGSSSIRIGNRRWGDNGYVRAGRQQARPVYQPHSQNSGASSSREPRNKEVVKGATTTGRRAKRALKREEADKAAAAKHQQHLVRLGRK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1395 249 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 249 - -
Prci8g1395 249 SUPERFAMILY RING/U-box 45 95 - -
Prci8g1395 249 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Prci8g1395 249 MobiDBLite consensus disorder prediction 186 249 - -
Prci8g1395 249 ProSiteProfiles Zinc finger RING-type profile. 46 89 IPR001841 -
Prci8g1395 249 MobiDBLite consensus disorder prediction 189 205 - -
Prci8g1395 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 39 158 IPR013083 -
Prci8g1395 249 SMART ring_2 46 88 IPR001841 -
Prci8g1395 249 MobiDBLite consensus disorder prediction 206 239 - -
Prci8g1395 249 Pfam Ring finger domain 46 89 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1395 1 249 C3H Transcription Factor Family AT5G19430 57.364 1.11e-86 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1395 - - qsa:O6P43_014716 345.51