Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1392 ATGGAAGAATCAGACAAATTACAATCAGAAGAGAATAAAATCTCTATGGAGAAACATAAGAAGAGAAAACTCAAAACACCTACTCAGGTTTATGCTTTGGAGAAATTTTATATCGAGCACAAATATCCCACTGAGGAAATGAAATTAGAACTTGCTGAGGAGTTGGGCTTGACAGAAAAACAAGTATCTGGATGGTTTTGCCATCGAAGGCTAAAAGATAAAAGATTGTTGAAAGATGAAGCTTGTGCTAATGGGCGACAAGATATTTTAAGTGGAGTCATCCAAGATCATGTCAGTGGGCTAGGGCAAGATTCATGTGGAAGCACCAAACATGGTGATTATAGGCATCTTGATCCCAAAGAGGTTGAAAGTCATGGCCTTCATGTGGGTCATGACCTTTTAGTTTCAGATGTGGCCTATGAACGTAGAAATCATTATTCAGAAAATGTTTGTGCAGTGGATGACACAGCATCTGAGAGCAGCTCATCTTTGCAAGATCAGGATCCCTATGATGCTGAGCATTCTGGGTATCTAACACCTAAAGGAGCTCTGCCAACTAAAAGTCCCAAGTCTGCCTCAAACATGAGATATAAACCATCAGGCTATCTTAAAGTAAAAGGGGAGATAGAAAACCCTGTCATAACTGCTGTTAAGAAGCAATTAGGAAGAAATTACCAAGAAGATGGTCCGCTACTTGGTATAGACTTTGATCCGCTTCCTCCAGGTGCATTTGAAAGTAAAATCGTGGATCTATTTCATGAAACATACTACATGGCAAATCGTGGTCTTCACTCTCCTGAAATTTCTGCTGTGAAAAGGCAACCCAGTCTTTCTGCTAGATATGATTTGTATAATACCAATTTCAATCCCCAAGATTCACACATGGAAGGAGCAGACCTCTCTGATTTCCAGGATAAGAAATCTCGCCAGCTTTCAAAGCAAAGGCCACCTTTGTACAGTCATACCTTTCGATTTCCTAACAGAAATTCTCTGGATTTGTACGAACGCTCTGTTGGAGAAGCAACTGCATATAATAGCAAAGAGAATCATAGAGTTGGCATCAAGCTTGGCCTTGAAGGGTTGAAATCTGATTCTGCAAGTTACCATAGTGATCACTATGATGGTAAACTTGCAGCAAACCCAAAAGACTCACTGTTGCATGGCTATGATAATGTCAATTCAAAGAATGTACTCAGTGAACATGTAACACTTAAGCCTTCAAGCTTGATCAGGAATCCTTATGTTTCTATGGATACTAAGGATAGAGGAGGCCTATCCAGTAGGATGATAAAGGAAAAGAAGTCTAGTGAAAAAATAAAGGCAAGAAAACAATGTGATAATCCAAATGGACTAAGGATGCTTTCGCATGAGGCTGCAAAACGTCGTGTTGATCCACCTCAACAATACAATGTTAAAGAAGAATTTGTTGCCGAGATGCAACTGCATAAAAGTCAGAGATCTGCCATGGAGGTGTCATCTAGCTTCAGTGAGGATGAAACTGCCAATCTCAGCTCGTCTCTCGATGAAGCAATCGGTTGCCATTAA 1545 0.4013 MEESDKLQSEENKISMEKHKKRKLKTPTQVYALEKFYIEHKYPTEEMKLELAEELGLTEKQVSGWFCHRRLKDKRLLKDEACANGRQDILSGVIQDHVSGLGQDSCGSTKHGDYRHLDPKEVESHGLHVGHDLLVSDVAYERRNHYSENVCAVDDTASESSSSLQDQDPYDAEHSGYLTPKGALPTKSPKSASNMRYKPSGYLKVKGEIENPVITAVKKQLGRNYQEDGPLLGIDFDPLPPGAFESKIVDLFHETYYMANRGLHSPEISAVKRQPSLSARYDLYNTNFNPQDSHMEGADLSDFQDKKSRQLSKQRPPLYSHTFRFPNRNSLDLYERSVGEATAYNSKENHRVGIKLGLEGLKSDSASYHSDHYDGKLAANPKDSLLHGYDNVNSKNVLSEHVTLKPSSLIRNPYVSMDTKDRGGLSSRMIKEKKSSEKIKARKQCDNPNGLRMLSHEAAKRRVDPPQQYNVKEEFVAEMQLHKSQRSAMEVSSSFSEDETANLSSSLDEAIGCH 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1392 514 MobiDBLite consensus disorder prediction 488 507 - -
Prci8g1392 514 SMART HOX_1 18 80 IPR001356 GO:0003677
Prci8g1392 514 MobiDBLite consensus disorder prediction 151 195 - -
Prci8g1392 514 MobiDBLite consensus disorder prediction 1 17 - -
Prci8g1392 514 MobiDBLite consensus disorder prediction 488 514 - -
Prci8g1392 514 MobiDBLite consensus disorder prediction 1 22 - -
Prci8g1392 514 Gene3D - 8 88 - -
Prci8g1392 514 MobiDBLite consensus disorder prediction 420 439 - -
Prci8g1392 514 MobiDBLite consensus disorder prediction 151 169 - -
Prci8g1392 514 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Prci8g1392 514 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 508 - -
Prci8g1392 514 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Prci8g1392 514 MobiDBLite consensus disorder prediction 424 439 - -
Prci8g1392 514 SUPERFAMILY Homeodomain-like 18 84 IPR009057 -
Prci8g1392 514 CDD homeodomain 20 75 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1392 Prci-Chr8 10566092 10571448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1392 3 508 Homeobox Transcription Factor Family AT4G03250 37.970 8.24e-77 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci8g1392 Homeodomain 1.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1392 - - gmx:100805913 609.757