Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1379 ATGTCCATGATAAAGAAGCGCTTTGCATACCTCACTGAAGAGATGCTGAAACAGAGCCTTGAAGAAGCATTGAGTATGGTTGGTGGAATAAGAGATTGGGGACCTGACATATCGGTATTGAGTGAGATAGAAGAGAGGGTTGGGTTGGAGGAACACAAATTGAGAGCAACGAAACACGTACTGAGAGAATATCGTGGGAACATGTCGAGTGCTTGTGTGCCGTTTATATTGGATGAAATGAGAAAGAGATCTATCGAGGAAGGAAGATCCAAGGACTTCGATGGGGAGTTCTATTTGGATTTGGTCCAGAAGCTTCATTCAATACCAAATGGGGGAATCTCAAACCAAAAAGCTTTCACAAGCGAGATTCGAGCTTTGGCAGAAATTAAACATCCCACTATTGTGAAGCTGCATGGATTTTGTTCCAAATTACAATTCTCCTTTTTGGTTTATGAGTTCTTGCAAGGCGGCAGCTTGGATAACGTACTAAAGAATGAAGAACAAGCCACTAAGTTTGGTTGGAATAAGAGAGTGAACATGGTTAAAGATGTGGCTAATGCTTTATTCCATATGCATCATGGCTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCAGAACATGAACAAGCTCACATCATGAATTTGGAACATCAAAGTTTTTGGACAATTCATGGAGGATTGAACTTACTCAAGTTACTTGGAAGTGCGTCAGCTTGTTTAAATTGTTGCACTTGA 759 0.4018 MSMIKKRFAYLTEEMLKQSLEEALSMVGGIRDWGPDISVLSEIEERVGLEEHKLRATKHVLREYRGNMSSACVPFILDEMRKRSIEEGRSKDFDGEFYLDLVQKLHSIPNGGISNQKAFTSEIRALAEIKHPTIVKLHGFCSKLQFSFLVYEFLQGGSLDNVLKNEEQATKFGWNKRVNMVKDVANALFHMHHGCSIPIVHRDISSKNVLLSSEHEQAHIMNLEHQSFWTIHGGLNLLKLLGSASACLNCCT 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1379 252 Pfam Chalcone and stilbene synthases, C-terminal domain 38 96 IPR012328 -
Prci8g1379 252 SMART tyrkin_6 99 251 IPR020635 GO:0004713|GO:0006468
Prci8g1379 252 Pfam Protein tyrosine and serine/threonine kinase 114 215 IPR001245 GO:0004672|GO:0006468
Prci8g1379 252 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Prci8g1379 252 PANTHER LEUCINE RICH REPEAT KINASE 2 102 227 - -
Prci8g1379 252 ProSiteProfiles Protein kinase domain profile. 59 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1379 252 SUPERFAMILY Thiolase-like 14 93 IPR016039 GO:0016746
Prci8g1379 252 Gene3D - 2 91 IPR016039 GO:0016746
Prci8g1379 252 Gene3D Transferase(Phosphotransferase) domain 1 92 224 - -
Prci8g1379 252 SUPERFAMILY Protein kinase-like (PK-like) 114 215 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1379 Prci-Chr8 10390086 10392114 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1379 102 216 Receptor kinase-like Gene Family AT4G08850 51.695 1.97e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g1379 PK_Tyr_Ser-Thr 6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1379 - - pcin:129317282 510.76