Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1376 ATGTTACCCAAGTTGCGAGTATTGAACCTCTCACATAATCATCTCTCTGGCACCATTTCTTCCATTTTCGGTCCAATGTCAGCTTTGTCTACTGTTGACATATCAAACAATCAATTAGAAGGCCGCCTTCCTAAAAACTCAGCCTTTTACAAGTTTGATGCATTGAGGAATAATAAAGGTTTGTGTGGTAATGTCACTGGTTTAAGTCGGTGTGGTGATTCCAAACTAAATGGACATAGCCATGGGAGTAAAAAGTTCGTGATAATATTCCTCCCATTGGCCATACTGCTATTAGTACTTGTTGGAGCATCTTACATTTTTTACCGAATAGCAAAAAGCAAAGATGGACAAGCACCACCAGACGAGGTTTATTCTATATGGAATCTTGAAAGAGAAATATTGTATGAAGATATCATCGAAGCCACAAAGGAATTTGATGACAAATATCTTATTGGGAAAGGCAGCCAAGGAAATGTTTACAGGGCTGAGTTGCCTACTGGTGATGTTGTTGCTGTAAAGAAGCTTCACTCTTTTGGTGGAGAAATCTCCAACCAGAAAGCTTTTACAAGTGAGCTTCAGGCTTTGACAGAACTCAAGCATCGTAACATTGTGAAGCTATATGGGTTTTATTCCAATGCTCAATTCTCCATCTTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGGATAACATACTAAAGAATGAGAAACAAGCCACTGAATTTGATTGGAAGAAGAGGGTGAATGCTGTTAAAGGTGTGGCTAATGCATTATTCTATATGCATCATGGCTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAATATTCTTCTAGGTTCTGAATATGAAGAAGCTCACATCATTGACTTTGGAACTGCAAAGCTTTTGAATCCTGACTCAAAAAATATGACCACATTTGTCGGCACATTTGGGTACGCTGCACCAGAGATAGCTTTCATCATGGAAGCCAATGAGAAATGTGATGTTTATAGTTTTGGAGTGTTGACTTTAGAAATCATCATGGGAATACATCCAGGAGAACTTATTTCATCTTTGATGGAGGGATCAACTGGTGATGATTTGTTGTTGAAGGATGTGTTAGACCCACGACTTTCTCCCCTCACAAAACCAATCCTAGATGAGGTGATCCTAGTTGCAAAAATAGCATGGTCCTGTTTGAATGAGAATCCTCAGTCTCGTCCAACCATGGAACAAGTATCTACGGAGCTCAGCGGTTCAATTCCTCCGTCCATTGGTAACTTGATCAATTTAACTCACATCCATCTCACAAACAATAGTCTCTCAGGACATGTTCCTTCCACTATAGGAAACATGACAAAGCTCACTGTCCTGCTGGTGAACCATAACAACCTCAGTGGTTACCTTCCACGAGAAATGAATAACTTTACCGGTTGGTATAACATCCAAGTGGGTTATAATAACTTCATTGGCCATTTGCCACATCAGGTTTGTCGAGGAGGCAAGTTATTTAGGTTTATGGCTTCTCATAACCATTTCACTGGTCCTATTCCAACAAGTTTGAAGAATTGCTCTAGTCTAGAAAGACTCGGGCTTGAAGGTAACCAATTAGCTGATAATGTGACTGATGCTTTTGGAGCATACCCTCAATTGAATTACATCAACCTGAGTGGTAATAAATTGTATGGCCATCTTTCATCAATGTGGGGGAAGTGTCCAAATCTCACGCAGCTTGTCATTGATAATAACAAGCTTTCTGGTGTTATACCACCGGAATTAGGAGATGCAACTAAGCTTGGTGTGCTTAATTTCTCTTCAAATCATTTCTCTGGACAAATTCCAAAAGAGCTAGGAAAGTTGGTCTCTCTGACACGTCTCTCTTTGAGCCATAATAACTTCTCAGGTAATGTTCCCTCAGATATAAAATCACTTAACCTACTTGAAGAGTTGGAGTTGGAAGCAAATAATTTCAATGGCTCAATCCCAAAAGAAATTGAGAGCTTAGAAAGGTTAAGAGAATTGAATCTGAGGAAAAACAGGTTTGAGGGAAGCATTTCCTTGGAGTTTGGGAAACTCAGAGATCTTGAACAACTTGATCTGAGTGAGAATTTGTTGAGTGGGAAAATACCCACAATGCTTGGAGTGTTACAGAAATTGGAAATATTGAACCTTTCACGTAATAATTTCTCTGGCACTATCTCCAGTTTCAGCAAAATGTTAGTTTCTGCTGATATATCATTCAACCAATTAGAAGGTCCTATTCCAAACAACCAAGCCTTTCTCACCTTTGAAGCATTGAGAAATAACAAAGGTTTGTGTGGTAATGTCTCAGGTTTACCATTGTGTACTAATTCCCAGCAGACAACTACTAATGCCACAATGGACTTTGATGTCAGATATCTCATTGCAAAAGGTGGTCAAGGAAGTGTTTACAGGGCAGAGTTGCCTACAGGTCATGTTGTTGCTGTAAAGAGGCTTCATTCATCAATATCAACCTTGACAGAGATCAAACACCGCAACATTGTGAAACTATATGGGTTTTGTTCCAATTCACAATTCTCCTTTTTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGGAGAACATACTGAAAAATGAGGAACAAGCCCCTAAGCTTGATTGGAATAAGAGAATCAATGTTGTTAAATGTGTAGCCAAAGCTTTATTCCATATGCATCATGGCTGTTCCATTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCAAAATATGAAGAAGCTCGCATCACTGACTTCGGAACAGCCAAGTTTTTGAACCCTAATTCAAGCAATATCACCACATTTGCAGGCACATTTGGGTATGCTGCTCCAGAGATTGCTTACATCATGAAGGCAAATGAGAAATGTGATGTCTATAGCTTTGGAGTGTTGGTTTTGGAAATCATTATGGGAATACATCCAGGAGAGTTTATTTCATATTTGGCGGAGAAATCAACCACATATGATTTGCTATTAAAAGATATGATGGATCCACGACTTTCACCCCCTATAAAACGAATCCGTCATGAGGTTATTGAAGCTGCAAAAATAGCATTTTCTTGTTTGAATGAGAATCCTCAATCTCGTCCAACCATGGAGCAAGTAGCTATGAAGCTTGAAAGGCCACCAAAATCTCATTTAGAGGATCAATTTGACACCATCACAATTGGACAACTCATGAAGGATTGA 3207 0.3923 MLPKLRVLNLSHNHLSGTISSIFGPMSALSTVDISNNQLEGRLPKNSAFYKFDALRNNKGLCGNVTGLSRCGDSKLNGHSHGSKKFVIIFLPLAILLLVLVGASYIFYRIAKSKDGQAPPDEVYSIWNLEREILYEDIIEATKEFDDKYLIGKGSQGNVYRAELPTGDVVAVKKLHSFGGEISNQKAFTSELQALTELKHRNIVKLYGFYSNAQFSILVYEFLEGGSLDNILKNEKQATEFDWKKRVNAVKGVANALFYMHHGCSIPIVHRDISSKNILLGSEYEEAHIIDFGTAKLLNPDSKNMTTFVGTFGYAAPEIAFIMEANEKCDVYSFGVLTLEIIMGIHPGELISSLMEGSTGDDLLLKDVLDPRLSPLTKPILDEVILVAKIAWSCLNENPQSRPTMEQVSTELSGSIPPSIGNLINLTHIHLTNNSLSGHVPSTIGNMTKLTVLLVNHNNLSGYLPREMNNFTGWYNIQVGYNNFIGHLPHQVCRGGKLFRFMASHNHFTGPIPTSLKNCSSLERLGLEGNQLADNVTDAFGAYPQLNYINLSGNKLYGHLSSMWGKCPNLTQLVIDNNKLSGVIPPELGDATKLGVLNFSSNHFSGQIPKELGKLVSLTRLSLSHNNFSGNVPSDIKSLNLLEELELEANNFNGSIPKEIESLERLRELNLRKNRFEGSISLEFGKLRDLEQLDLSENLLSGKIPTMLGVLQKLEILNLSRNNFSGTISSFSKMLVSADISFNQLEGPIPNNQAFLTFEALRNNKGLCGNVSGLPLCTNSQQTTTNATMDFDVRYLIAKGGQGSVYRAELPTGHVVAVKRLHSSISTLTEIKHRNIVKLYGFCSNSQFSFLVYEFLEGGSLENILKNEEQAPKLDWNKRINVVKCVAKALFHMHHGCSIPIVHRDISSKNVLLSSKYEEARITDFGTAKFLNPNSSNITTFAGTFGYAAPEIAYIMKANEKCDVYSFGVLVLEIIMGIHPGEFISYLAEKSTTYDLLLKDMMDPRLSPPIKRIRHEVIEAAKIAFSCLNENPQSRPTMEQVAMKLERPPKSHLEDQFDTITIGQLMKD 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1376 1068 ProSiteProfiles Protein kinase domain profile. 145 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1376 1068 FunFam MDIS1-interacting receptor like kinase 2 223 417 - -
Prci8g1376 1068 SUPERFAMILY Protein kinase-like (PK-like) 778 1045 IPR011009 -
Prci8g1376 1068 Gene3D Phosphorylase Kinase; domain 1 779 855 - -
Prci8g1376 1068 SMART LRR_typ_2 663 686 IPR003591 -
Prci8g1376 1068 SMART LRR_typ_2 615 639 IPR003591 -
Prci8g1376 1068 SMART LRR_typ_2 447 471 IPR003591 -
Prci8g1376 1068 SMART LRR_typ_2 687 711 IPR003591 -
Prci8g1376 1068 SMART LRR_typ_2 2 25 IPR003591 -
Prci8g1376 1068 SMART LRR_typ_2 26 51 IPR003591 -
Prci8g1376 1068 SMART LRR_typ_2 423 446 IPR003591 -
Prci8g1376 1068 ProSitePatterns Tyrosine protein kinases specific active-site signature. 268 280 IPR008266 GO:0004672|GO:0006468
Prci8g1376 1068 FunFam MDIS1-interacting receptor like kinase 2 856 1051 - -
Prci8g1376 1068 Pfam Leucine Rich Repeat 4 23 IPR001611 GO:0005515
Prci8g1376 1068 SUPERFAMILY L domain-like 2 44 - -
Prci8g1376 1068 FunFam Leucine-rich repeat receptor protein kinase MSP1 109 222 - -
Prci8g1376 1068 Pfam Leucine rich repeat 568 628 IPR001611 GO:0005515
Prci8g1376 1068 Gene3D Transferase(Phosphotransferase) domain 1 856 1062 - -
Prci8g1376 1068 Gene3D Transferase(Phosphotransferase) domain 1 223 413 - -
Prci8g1376 1068 Gene3D Phosphorylase Kinase; domain 1 110 222 - -
Prci8g1376 1068 Pfam Protein kinase domain 797 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1376 1068 Pfam Protein kinase domain 147 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1376 1068 SUPERFAMILY Protein kinase-like (PK-like) 123 410 IPR011009 -
Prci8g1376 1068 ProSiteProfiles Protein kinase domain profile. 791 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1376 1068 SUPERFAMILY RNI-like 411 751 - -
Prci8g1376 1068 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 472 781 - -
Prci8g1376 1068 PANTHER LEUCINE RICH REPEAT KINASE 2 2 413 - -
Prci8g1376 1068 Gene3D Ribonuclease Inhibitor 414 778 IPR032675 -
Prci8g1376 1068 Gene3D Ribonuclease Inhibitor 1 74 IPR032675 -
Prci8g1376 1068 SMART serkin_6 791 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1376 1068 SMART serkin_6 145 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1376 1068 ProSitePatterns Tyrosine protein kinases specific active-site signature. 901 913 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1376 Prci-Chr8 10304324 10340203 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1376 412 769 Receptor kinase-like Gene Family AT5G65700 30.854 2.57e-40 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g1376 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1376 - - pcin:129317280 2093.16