Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1368 ATGTTATCCAAGTTGCAAGTATTGAACCTCTCGCATAATCATCTCTCTGGAAACATTTCTTCCTTCGGTGAAATGCCAGCTTTGTCTACTGTTGACATATCATACAATCAATTAGAAGGCCCCCTTCCAAAAAATAAAGCCTTTCAAAACTTTGCCGCTTTGAGGAATAATAAAGGCTTGTGCGGTAACGTCGCTGGTTTGAGTCCATGCGGTGAGCCAAAACCCAAACCAAGTGGACAGAGCCAGAGGATCAAAAGGTTCTTGATAATATTCCTCCCATTGGCCATACTGCTATTAGTACTTGTTGGAGCATCTTACATTTTTTATCGAGTAGCAACAAAAAGAAAAGGCAAAAATGAAGAAGCATCGCAAGAAGAGGTTTATTTTGTGGGGAGTCTTGAAAAAGAAATATCGTGCCAAGATATCATCAAAGCCACAGAGGAATTTGATGACAAATATCTTATAGGGAGAGGGAGCCAGGGAAGTGTTTATATAGCTGAGTTGCCTAGAGGTGATGTTTATGCTGTAAAGAAGCTTCATTCGATACCAAGTGGGGAAATCTTCAACCAGAAAGCTTTTACAAGTGAGATTCGAGCTTTGACGGAGATCAAACATCGTAACATTGTGAAGCTGCATGGGTTTTACTCCAATTCACAATTCTCCATTTTGGTTTATGAGTTCCTGGAAGGTGGCAGCTTGAATAACATACTAAAGAATGAGAAACAAGCCACTGAGTTTGACTGGAATAAGAGGGTGAATGCTGTTAAAGGTGTGGCTAATGCATTATTCCATATGCATCATGGCTGCTCAATTCCTATTGTGCATCGTGACATATCAAGCAAGAATATTCTTCTGAGTTCAGAATATGAAGAAGCTCACATCATTGACTTTGGAACTGCTAAGTTTTTGAATCCTGACTCAAACAACATGACCACATTTGCTGGCACATTTGGGTATGCTGCACCAGAGATTGCTTTCGTTATGCAAGCCAACGAGAAATGTGATGTTTATAGCTTTGGAGTGTTGACTTTAGAAATCATCATGGGGACACATCCTGCAGAGCTTATTTTATCTTTGGCAGACAGATCAACCACTGATCATGACTTGTTGAAAGATGTGTTGGACTCACGACTTTCTCCAATTAGAAAACCGGTCCTAGATGAGGTGATCTTGATTGCAAAAATAGCATTTTCTTGCCTGAAAGATAATCCTCGGTCTCGTCCAACCATGGAACAAGTGTCTAAGGAGCTTGAGAAGCCGCCAAAATCTCATTCAGAGGACCAATTTCACACCATCACAATTGGACAACTCATGAGGGATTGA 1323 0.4059 MLSKLQVLNLSHNHLSGNISSFGEMPALSTVDISYNQLEGPLPKNKAFQNFAALRNNKGLCGNVAGLSPCGEPKPKPSGQSQRIKRFLIIFLPLAILLLVLVGASYIFYRVATKRKGKNEEASQEEVYFVGSLEKEISCQDIIKATEEFDDKYLIGRGSQGSVYIAELPRGDVYAVKKLHSIPSGEIFNQKAFTSEIRALTEIKHRNIVKLHGFYSNSQFSILVYEFLEGGSLNNILKNEKQATEFDWNKRVNAVKGVANALFHMHHGCSIPIVHRDISSKNILLSSEYEEAHIIDFGTAKFLNPDSNNMTTFAGTFGYAAPEIAFVMQANEKCDVYSFGVLTLEIIMGTHPAELILSLADRSTTDHDLLKDVLDSRLSPIRKPVLDEVILIAKIAFSCLKDNPRSRPTMEQVSKELEKPPKSHSEDQFHTITIGQLMRD 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1368 440 ProSiteProfiles Leucine-rich repeat profile. 4 26 IPR001611 GO:0005515
Prci8g1368 440 ProSitePatterns Tyrosine protein kinases specific active-site signature. 273 285 IPR008266 GO:0004672|GO:0006468
Prci8g1368 440 MobiDBLite consensus disorder prediction 405 426 - -
Prci8g1368 440 Gene3D Transferase(Phosphotransferase) domain 1 228 435 - -
Prci8g1368 440 SUPERFAMILY Protein kinase-like (PK-like) 132 417 IPR011009 -
Prci8g1368 440 FunFam Leucine-rich repeat receptor protein kinase MSP1 112 227 - -
Prci8g1368 440 ProSiteProfiles Protein kinase domain profile. 149 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1368 440 SUPERFAMILY L domain-like 2 54 - -
Prci8g1368 440 Gene3D Phosphorylase Kinase; domain 1 109 227 - -
Prci8g1368 440 Pfam Leucine Rich repeats (2 copies) 4 38 IPR025875 -
Prci8g1368 440 Gene3D Ribonuclease Inhibitor 1 77 IPR032675 -
Prci8g1368 440 PANTHER LEUCINE RICH REPEAT KINASE 2 2 423 - -
Prci8g1368 440 Pfam Protein kinase domain 151 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1368 440 MobiDBLite consensus disorder prediction 408 426 - -
Prci8g1368 440 FunFam MDIS1-interacting receptor like kinase 2 228 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1368 Prci-Chr8 10152612 10155311 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1368 2 326 Receptor kinase-like Gene Family AT4G08850 47.463 2.29e-85 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g1368 Pkinase 7.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1368 - - pcin:129317280 619.387