Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1364 ATGCATGTTCCAAGCATATTCTTCTGCGTCTTTATATGCCTCTCCTCTTTCTCCCAAGCTGCTTCTGCTGCTGAAGATCAATTTCTTCATAGTGAAGGAAGTGCCTTGTTGAAGTGGAAAGCCAGCCTTGATGAACAAAGCCCAGACGCATTGTCTTCTTGGAAGAATGGAACCAGTCCGTGCAGAAACTGGACAGGGATTACATGTGACGAATCTTTGTCAGTTACCATGATTAATCTAACAAGTCTTAGGCTGCAAGGTACACTTCAAAATCTGAGATTCTTGTCCTTCCCTAACCTCAAACATTTCGATATAAGTAATAATTCCTTCTCTGGAAATATTCCTCCCCAAGTTGGTAACTTGTCCAGTATTCTTACACTGACAATGTCTCACAATTTATTAATGGGTTCTATCCCTGGAGAAATTGGAGCACTGAGCACTCTAAATGTTCTTGATTTGAGCGTTTGCAATCTCACTGGGCATATTCCTCGAGAAATTGGGAAGTTGAGTGATCTGACAGATCTAATTCTTGTAACTAATCAACTCTCAGGTTCCATTCCCCAAGAAATCGGTATGCTGAGCAATCTCATACAACTTGATTTATCAGAAAATTCAAAATTCTTCAGTGGAATCCCTTCTACGATTGGAAACTTGACTAAGTTAAAGCTATTGTTTCTCTATAGTAGCAATCTCACTGGTCTTGTTCCCAATGAACTTGGGAAACTACATTGTCTTGTAGATATTCAATTGTCAGATAATAACCTTTATGGTCCAATCCCATCTTTCATAGGAAACTTCACAAGTCTTGAAAAATTGTCTTTGTACTCGAACAAGTTTTCTGGACCGATTCCTGCCTCCATAGGAAACTTGATCAATTTAGAAATCCTTTACCTCAATATCAACAATCTTTCAGGATCTATTCCTCCAACCATAGGAAATTTGACAAAGCTCACTGAATTAGCACTTCATATGAACAATCTCAATGGTCAACTTCCGCTTCAAATAAATAACCTCACGAGTGTTTCTAACTTACAACTAGGTTGGAATCATTTCAATGGCCATTTGCCACAACAAATTTGCCTCAGTGGCACCCTAAAGTATTTTGGAGCCACTAAATGTAGCTTCACTGGTCCTATTCCAGAAAGCTTCAAGAACTGTTCAAGTCTTGAAAGACTCAAGCTTGAAGATAACCAACTGGTTCAAGATATAACAAATTTTTTTGGTGTATATCCAAATTTGGAATTCATAGATATAAGTGTCAATAAATTGTATGGCCACCTTTCATCTACATGGGGAAAGTGTCCTAAACTAGCCCAGTTCAAGATTTCTAACAACAACCTTTCTGGTGTTATACCATTAGAATTAGGTGAGGCAATGAATCTTAATGAAGTCAACTTGTCCTCAAATAATCTAGCTGGAGAAATTCCAAAAGAGCTGAGGAAGTTGACCTCATTGGCTAGGCTTTCGTTAAGCCACAATCAACTTTCAGGCAAGATTCCCACAGAAATAGGGTCACTAAATCATCTTGAAGTTTTGGGGCTATCAGGAAATAAATTTTATGGCTCAATCACTAAAGAACTTGGGGGGTTAACAAGGTTGAGAGAATTAAATTTGGGCAAAAACAGATTTGAAGGAAGCATCCCCATGGAGTTTAGTGAACTCCAATCTCTTGAAAATCTTGATCTCAGCCAGAATATGTTGAGTGGGAAAATACCAACAATGCTTGGAGCGTTACAGAAATTGCAAATATTGAACCTCTCACATAATAACTTCTCTGGCAACATTTCATCCATTTTCAATGGGATGTCAGCCTTGACTTCTGTTGACATATCATTCAACCAACTTGAAGGCCCCCTTCCAAACAATCGAGCCTTTCTTCACAGTAGCTTTGAAGCATTGAGGAATAATAAAGATTTGTGTGGCAATGTCACAGGTTTACAACCTTGTAGTAACTCCCAAACAAATGCACGCGGTCATGAGGGAAAAAAGTTCTTGATGATATTCCTCCCATTGGCCATACTGCTATTTGTTGTGGTTGGAGCTTCATGCATTTTCTTTAGACTTAGAGAGAGGCAAACAAAAAACAAAGATGAAGAAGCAGATGTTTATTTTGTATGGAATTCTGATAGAGAAGTATTGCATGAAAATATTATCGAAGCCACAAAGGAGTTTGATGACAGATATCTCATCGGGAAAGGGGGCCAAGGAAGTGTATATAGGGCTGAGTTGCCTTCAGGTGATGTTGTAGCTGTAAAGAAGCTTCATTCTTTTCGTGGGGAAATCTCCAACCAGAAAGCTTTTACAAGTGAGATTCAAGCTTTGACAGAAATCAAACATCGTAATATTGTGAAGCTGTATGGGTTTTGTTCCAATTCACGATTCTCCTTTTTGGTTTATGAGTTCCTGGAAGGTGGAAGCCTGGATAATATACTGAAGAATGACAAACAAGCCACTGAGCTTGATTGGAATAAGAGGGTGAACTCCATTAAAGGTGTGGCTAATGCTTTATTTCACATGCATCATGGTTGTTCATTTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTCCTTCTAAGTTCAGATTATGAAGAAGTTCGCATCATTGACTTTGGTACAGCCAAGTTTTTGAAGCCAGAATCAAGCAATATGACCACATTCGTAGGCACATTTGGATATGCAGCTCCAGAGATTGCTCTCATTATGGAAGCAAACGAGAAATGTGACGTTTACAGCTTTGGAGTGTTGACTTTGGAAATCATAATGGGAATCCACCCAAGAGAACTTATTTCATCATTGGCTGAGAAATCAACTAACAACGATTTGATGTTGTTGAAGGATATGTTAGACTCACGACTTTATTATCCTACAGAACCAATCTCTGATGAGGTAATCTTCATTGCGAAAATAGCATTTTCTTGCTTGAAGGAGAACCCTCGATATCGTCCAACTATGGAACAAGTATCTGTAGATCTCGCAAGGTCATCATCAAGATCTCATTTAGAGGATCAACTTGGCACCATCACAATTGGACAGCTTATGAAGGATTGA 3051 0.3871 MHVPSIFFCVFICLSSFSQAASAAEDQFLHSEGSALLKWKASLDEQSPDALSSWKNGTSPCRNWTGITCDESLSVTMINLTSLRLQGTLQNLRFLSFPNLKHFDISNNSFSGNIPPQVGNLSSILTLTMSHNLLMGSIPGEIGALSTLNVLDLSVCNLTGHIPREIGKLSDLTDLILVTNQLSGSIPQEIGMLSNLIQLDLSENSKFFSGIPSTIGNLTKLKLLFLYSSNLTGLVPNELGKLHCLVDIQLSDNNLYGPIPSFIGNFTSLEKLSLYSNKFSGPIPASIGNLINLEILYLNINNLSGSIPPTIGNLTKLTELALHMNNLNGQLPLQINNLTSVSNLQLGWNHFNGHLPQQICLSGTLKYFGATKCSFTGPIPESFKNCSSLERLKLEDNQLVQDITNFFGVYPNLEFIDISVNKLYGHLSSTWGKCPKLAQFKISNNNLSGVIPLELGEAMNLNEVNLSSNNLAGEIPKELRKLTSLARLSLSHNQLSGKIPTEIGSLNHLEVLGLSGNKFYGSITKELGGLTRLRELNLGKNRFEGSIPMEFSELQSLENLDLSQNMLSGKIPTMLGALQKLQILNLSHNNFSGNISSIFNGMSALTSVDISFNQLEGPLPNNRAFLHSSFEALRNNKDLCGNVTGLQPCSNSQTNARGHEGKKFLMIFLPLAILLFVVVGASCIFFRLRERQTKNKDEEADVYFVWNSDREVLHENIIEATKEFDDRYLIGKGGQGSVYRAELPSGDVVAVKKLHSFRGEISNQKAFTSEIQALTEIKHRNIVKLYGFCSNSRFSFLVYEFLEGGSLDNILKNDKQATELDWNKRVNSIKGVANALFHMHHGCSFPIVHRDISSKNVLLSSDYEEVRIIDFGTAKFLKPESSNMTTFVGTFGYAAPEIALIMEANEKCDVYSFGVLTLEIIMGIHPRELISSLAEKSTNNDLMLLKDMLDSRLYYPTEPISDEVIFIAKIAFSCLKENPRYRPTMEQVSVDLARSSSRSHLEDQLGTITIGQLMKD 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1364 1016 Pfam Leucine Rich Repeat 99 120 IPR001611 GO:0005515
Prci8g1364 1016 SMART LRR_typ_2 554 577 IPR003591 -
Prci8g1364 1016 SMART LRR_typ_2 578 601 IPR003591 -
Prci8g1364 1016 SMART LRR_typ_2 530 553 IPR003591 -
Prci8g1364 1016 SMART LRR_typ_2 290 314 IPR003591 -
Prci8g1364 1016 SMART LRR_typ_2 482 506 IPR003591 -
Prci8g1364 1016 SMART LRR_typ_2 602 627 IPR003591 -
Prci8g1364 1016 SMART LRR_typ_2 97 121 IPR003591 -
Prci8g1364 1016 SMART LRR_typ_2 145 169 IPR003591 -
Prci8g1364 1016 SMART LRR_typ_2 338 362 IPR003591 -
Prci8g1364 1016 SMART LRR_typ_2 218 241 IPR003591 -
Prci8g1364 1016 SUPERFAMILY L domain-like 56 309 - -
Prci8g1364 1016 SUPERFAMILY Protein kinase-like (PK-like) 705 991 IPR011009 -
Prci8g1364 1016 Pfam Protein kinase domain 728 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1364 1016 Gene3D Ribonuclease Inhibitor 29 189 IPR032675 -
Prci8g1364 1016 Gene3D Ribonuclease Inhibitor 525 650 IPR032675 -
Prci8g1364 1016 FunFam MDIS1-interacting receptor like kinase 2 802 998 - -
Prci8g1364 1016 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 339 653 - -
Prci8g1364 1016 Gene3D Ribonuclease Inhibitor 358 454 IPR032675 -
Prci8g1364 1016 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 687 801 - -
Prci8g1364 1016 FunFam Piriformospora indica-insensitive protein 2 236 331 - -
Prci8g1364 1016 Gene3D Ribonuclease Inhibitor 205 357 IPR032675 -
Prci8g1364 1016 ProSitePatterns Tyrosine protein kinases specific active-site signature. 847 859 IPR008266 GO:0004672|GO:0006468
Prci8g1364 1016 Gene3D Phosphorylase Kinase; domain 1 686 801 - -
Prci8g1364 1016 Gene3D Transferase(Phosphotransferase) domain 1 802 1008 - -
Prci8g1364 1016 PANTHER LEUCINE RICH REPEAT KINASE 2 263 997 - -
Prci8g1364 1016 ProSiteProfiles Protein kinase domain profile. 724 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1364 1016 Pfam Leucine rich repeat 532 591 IPR001611 GO:0005515
Prci8g1364 1016 Pfam Leucine rich repeat 460 519 IPR001611 GO:0005515
Prci8g1364 1016 Gene3D Ribonuclease Inhibitor 457 524 IPR032675 -
Prci8g1364 1016 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Prci8g1364 1016 SUPERFAMILY L domain-like 332 651 - -
Prci8g1364 1016 FunFam Nuclear pore complex protein NUP107 29 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1364 Prci-Chr8 9947690 9950975 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1364 6 896 Receptor kinase-like Gene Family AT4G08850 43.026 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g1364 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1364 - - pcin:129318235 1309.66