Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1358 ATGTCTGAAAGTGATTCCACTAAGCTTACAGCTTTATGGTGTATTCTCTGCATCTTCTTCTGTGTCTCATCTGCCACTGAAGAACCTCACGGCGAAGCAAGTGCTCTGTTGAAGTGGAAAGCCAGCCTTAAACTTGACAGCCAAACCATCTTGTCTTCATGGAAGAATGGTACCAGTCCATGCAGAAACTGGACAGGGATTTCATGCGACGAGTCGTCCTTCTCAGTTTCCATGATCAATCTTACAAGTCTTGGACTTCAAGGTAGGCTCCAAAATCTCAGCTTCTCCTCCTTACCAAACCTCGTACACTTCGATATAAGTTACAACAACTTCTCTGGAAATATTCCGCCCCAAGTTAGTAACTTGTCCAGTATTCTTAGAATGATCATGTCTCACAATTTCTTAGAGGGTCCCATCCCTAAAGAAATAGGGTCACTGAGCACTCTAAATTTGCTTGATATTAGTGTCTGTAATCTCACTGATTCTATTCCACCTGAGATTGGGAACTTGAGTAGTCTGACTGATCTTATTCTGGGACTTAACAGACTCTCTGGTTCCATTCCTCAAGAGATTGGTAGGCTTAGCAATCTCACACAACTTGATTTGTCAGAAAATCCTTTTCAATCTGGTGAAATCCCTTCTGCAATAGGAAACTTGAGGAAGTTAAAGCAACTATACCTCTATGATTGCAGTCTTACTGGTCGTATTCCCAATGAACTTGGGAAACTACATTCTCTTGTGCATATTCAATTGCTAGATAATAATCTCTATGGTCCAATCCCATCTTTCATAGGAAACTTGACAAATCTCCAAAGTTTGTATTTGTACACAAACAATCTATCTGGGTCAATTCCTGCCTCTATTGGAAACTTGGTCAATTTAGAAATACTTGACCTTGGAGAGAACAATCTTTCTGGACCTATTCCATCCACCATAGGAAATTTGACAGCTCTCACTCAGCTTGTGTTGTTTCACAACAACCTTAGTGGTCACATTCCTCCAGAAGTAGATAATCTTACTAGTTTGGTCGACTTACAACTGGGTTGGAATAATTTCATTGGCCATTTGCCACAACATATTTGCCTTGGTGGCATGTTAGAGCGTTTTGGAGCACCTGGCAATAGTTTCACTGGTCTGATTCCAACAAGCTTGAAGAATTGTTCTAAGCTTGAAAGACTTACACTTAACGATAACCAATTGGTTCAAGATATAAGTAATTCTTTTGGTACATATCCAAATTTGGAATTCATTGACTTAAGTGGCAATAAACTTTATGGCCATCTTTCATCCACGTGGGGCAAGTGTCCTAGTCTCTCACAGTTCAAGATATCTAGCAACAATATTTCTGGGAGGATACCTTCAGGAATAGGGGGGGCAACAAATCTTTTTGAACTTGACCTGTCTTCAAATCATCTTGTTGGAGAAATTCCAACAAATTTGTTGAAGTTGACCTCATTGAGTAAACTTTCTTTAAGCCACAATCAACTTTTAGGCAAGATTCCCCCAGAAATAGGATCATTGAATCATCTTGAAATTTTAGAGCTAGAAGGAAATAAATTCAGTGGTCCCATCACAGAAAAGGTTTGGGGCATGAAAATGTTGAGGGAATTGAACATGAGCAAAAACAAATTTGAGGGTCCCATTTCCCTGCAGTTTGGTCAGCTCCAAGATCTTGAAAAACTTGATCTTAGTGAAAATTTCTTGAGTGGAAAAATACCAAAAACAATTGGAGCATTACCCAAGTTGCAAATATTGAACCTCTCGCATAATAGTTTCTCTGGCGAGATTTCATCCGCTTTTAATGGAAGATCAGCCTTGACTTCTGTTGACATATCATATAACCAATTAGAAGGTCCTATTCCAAACAATCATGCCTTCCAAACATTTGCGGCATTGAAGAATAACAAAGGCTTGTGTGGCAATGTCACTGGTTTACATCTTTGCAGTGATTCTTCCCAAAATAATGTACATGGTAATAAAAAGAGTGAAAAAGTCAAGTTACTGATAATATTCCTCCCATTGGGTGTTGTAGTATTGCTAGTAGGGACTGGAGTGTTTTCCTTTTTCTGTCATGGGGCAAGGAAAGCAAGAAACAAAGACGAGGAAGTCCAAGAAGATCTTTTTCTTGTTTGGAGTTCTGAAAGAGAATTATTGTATCAAGATATTGTAGAAGCCACGAAGAATTTTGATGATAGATATCTTGTTGGGAAGGGAGGTCAAGGAAGTATTTATAGGGCTGAGTTGCCCACAGGTCTGGTTGTTGCTGTGAAGAAGCTTCATTCAATGCCAAGTGGGGAAATCTCCAACCTAACAGCTTTCACAAGTGAAATTCGAGCTCTGACAGAAATCAAACATCGTAACATTGTCAAGTTATATGGGTTCTGCTCAAATTCACGCTCCTCATTTTTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGAATAACATACTAAAGAATGATGAACAAGCCATTAAGCTTGATTGGAATAGGAGGATGAACCTTGTTAAAAGTGTGGCCAATGCTTTATTCCATATGCATCATGGCTGTTCAATTCCTATCGTTCATCGAGACATATCAAGCAAGAATGTTGTTTTAGATTCAGAATATCAAGAAGCTCGGATCATTGATTTTGGAACAGCAAAGTTTCTAAATCCTGAGTCAGAAAATATAACCTCTTTCGTAGGTACATTTGGTTATGCTGCACCAGAGATTACTTATATTATCAAGGCGAATGAGAAGTGTGATGTTTACAGCTTTGGAGTGTTGACTTTGGAGATCATAATGGGAATGCATCCTGGAGAGCTCATTGCTTCTTTGACAGAGACACCAACAACCTATGACTTGCCATTGAAGGATGTATTGGATGGAAGGCTTCCTCGACCGACAGGATCAGTTGTTGAGGAGTTAATGTTGATAGCAACATTGGCATTTGCTTGCTTGGATAAGAATCCATGGTCTCGTCCAACCATGGACCAAGTAGCAATGAAGCTTATGACGCCAAAAACAGATTTGGTGGACCAGTTTGACACCATCACAATTGGACAACTTATCATGAGAGGATCAAACTGA 3069 0.3949 MSESDSTKLTALWCILCIFFCVSSATEEPHGEASALLKWKASLKLDSQTILSSWKNGTSPCRNWTGISCDESSFSVSMINLTSLGLQGRLQNLSFSSLPNLVHFDISYNNFSGNIPPQVSNLSSILRMIMSHNFLEGPIPKEIGSLSTLNLLDISVCNLTDSIPPEIGNLSSLTDLILGLNRLSGSIPQEIGRLSNLTQLDLSENPFQSGEIPSAIGNLRKLKQLYLYDCSLTGRIPNELGKLHSLVHIQLLDNNLYGPIPSFIGNLTNLQSLYLYTNNLSGSIPASIGNLVNLEILDLGENNLSGPIPSTIGNLTALTQLVLFHNNLSGHIPPEVDNLTSLVDLQLGWNNFIGHLPQHICLGGMLERFGAPGNSFTGLIPTSLKNCSKLERLTLNDNQLVQDISNSFGTYPNLEFIDLSGNKLYGHLSSTWGKCPSLSQFKISSNNISGRIPSGIGGATNLFELDLSSNHLVGEIPTNLLKLTSLSKLSLSHNQLLGKIPPEIGSLNHLEILELEGNKFSGPITEKVWGMKMLRELNMSKNKFEGPISLQFGQLQDLEKLDLSENFLSGKIPKTIGALPKLQILNLSHNSFSGEISSAFNGRSALTSVDISYNQLEGPIPNNHAFQTFAALKNNKGLCGNVTGLHLCSDSSQNNVHGNKKSEKVKLLIIFLPLGVVVLLVGTGVFSFFCHGARKARNKDEEVQEDLFLVWSSERELLYQDIVEATKNFDDRYLVGKGGQGSIYRAELPTGLVVAVKKLHSMPSGEISNLTAFTSEIRALTEIKHRNIVKLYGFCSNSRSSFLVYEFLEGGSLNNILKNDEQAIKLDWNRRMNLVKSVANALFHMHHGCSIPIVHRDISSKNVVLDSEYQEARIIDFGTAKFLNPESENITSFVGTFGYAAPEITYIIKANEKCDVYSFGVLTLEIIMGMHPGELIASLTETPTTYDLPLKDVLDGRLPRPTGSVVEELMLIATLAFACLDKNPWSRPTMDQVAMKLMTPKTDLVDQFDTITIGQLIMRGSN 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1358 1022 Pfam Protein kinase domain 734 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1358 1022 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 188 284 - -
Prci8g1358 1022 FunFam Leucine-rich repeat receptor protein kinase MSP1 692 807 - -
Prci8g1358 1022 Pfam Leucine Rich Repeat 221 243 IPR001611 GO:0005515
Prci8g1358 1022 SUPERFAMILY L domain-like 32 283 - -
Prci8g1358 1022 FunFam Nuclear pore complex protein NUP107 30 181 - -
Prci8g1358 1022 SUPERFAMILY RNI-like 225 619 - -
Prci8g1358 1022 Gene3D Phosphorylase Kinase; domain 1 690 807 - -
Prci8g1358 1022 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 254 998 - -
Prci8g1358 1022 FunFam MDIS1-interacting receptor like kinase 2 808 1003 - -
Prci8g1358 1022 Pfam Leucine rich repeat 485 544 IPR001611 GO:0005515
Prci8g1358 1022 Pfam Leucine rich repeat 374 424 IPR001611 GO:0005515
Prci8g1358 1022 Pfam Leucine rich repeat 552 591 IPR001611 GO:0005515
Prci8g1358 1022 ProSitePatterns Tyrosine protein kinases specific active-site signature. 853 865 IPR008266 GO:0004672|GO:0006468
Prci8g1358 1022 SMART LRR_sd22_2 291 317 - -
Prci8g1358 1022 SMART LRR_sd22_2 387 406 - -
Prci8g1358 1022 SMART LRR_sd22_2 98 124 - -
Prci8g1358 1022 SMART LRR_sd22_2 555 589 - -
Prci8g1358 1022 SMART LRR_sd22_2 194 221 - -
Prci8g1358 1022 SMART LRR_sd22_2 267 282 - -
Prci8g1358 1022 SMART LRR_sd22_2 483 509 - -
Prci8g1358 1022 SUPERFAMILY Protein kinase-like (PK-like) 710 997 IPR011009 -
Prci8g1358 1022 ProSiteProfiles Protein kinase domain profile. 729 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1358 1022 Gene3D Ribonuclease Inhibitor 208 363 IPR032675 -
Prci8g1358 1022 Gene3D Ribonuclease Inhibitor 364 651 IPR032675 -
Prci8g1358 1022 Gene3D Transferase(Phosphotransferase) domain 1 808 1011 - -
Prci8g1358 1022 FunFam Leucine-rich repeat family protein 368 651 - -
Prci8g1358 1022 SMART LRR_typ_2 483 507 IPR003591 -
Prci8g1358 1022 SMART LRR_typ_2 579 602 IPR003591 -
Prci8g1358 1022 SMART LRR_typ_2 291 315 IPR003591 -
Prci8g1358 1022 SMART LRR_typ_2 267 290 IPR003591 -
Prci8g1358 1022 SMART LRR_typ_2 98 122 IPR003591 -
Prci8g1358 1022 SMART LRR_typ_2 219 243 IPR003591 -
Prci8g1358 1022 SMART LRR_typ_2 339 363 IPR003591 -
Prci8g1358 1022 SMART LRR_typ_2 170 194 IPR003591 -
Prci8g1358 1022 Gene3D Ribonuclease Inhibitor 30 207 IPR032675 -
Prci8g1358 1022 FunFam Leucine-rich repeat receptor protein kinase EMS1 285 367 - -
Prci8g1358 1022 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1358 Prci-Chr8 9688087 9691452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1358 15 902 Receptor kinase-like Gene Family AT4G08850 43.211 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g1358 Pkinase 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1358 - - pcin:129318235 1996.86