Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1353 ATGCATGGTGCAGAGATTGCTTTCACTATGCAAGTAAATGAGAAATGTGATGTTTATAGTTTTGGAGTTCTCACATTGGAAATCCTTATGGGAAAACATCCAGGGGAGCTTATTGAATCTCTAAGAGAGATTCCAACATCCTATGATTTGCCATTTAAGAATGTGTTGGATCAGCGGCTTCCTCCACCCTCAGACTTGGTTCTTGAGGAAGTAATATTGATTGCAAAAATAATACTTGTTTGCTTGAATGACAATCCACATCATCGTCCAACCATGGAACAAGTCTGTTTGCAACTTGAGAGGCCTGAATCTTATTTTGTGAACCAATTTGACAACATCACCATTGGACAACTCATGAAAGTTTAA 366 0.3825 MHGAEIAFTMQVNEKCDVYSFGVLTLEILMGKHPGELIESLREIPTSYDLPFKNVLDQRLPPPSDLVLEEVILIAKIILVCLNDNPHHRPTMEQVCLQLERPESYFVNQFDNITIGQLMKV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1353 121 SUPERFAMILY Protein kinase-like (PK-like) 5 103 IPR011009 -
Prci8g1353 121 ProSiteProfiles Protein kinase domain profile. 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1353 121 Gene3D Transferase(Phosphotransferase) domain 1 4 114 - -
Prci8g1353 121 PANTHER LEUCINE RICH REPEAT KINASE 2 5 103 - -
Prci8g1353 121 Pfam Protein tyrosine and serine/threonine kinase 5 98 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1353 Prci-Chr8 9616051 9616416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1353 15 104 Receptor kinase-like Gene Family AT1G16260 38.144 3.20e-12 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g1353 PK_Tyr_Ser-Thr 2.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1353 - - pcin:129317259 177.563