Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1352 ATGGTGTTCAAGCCCCAAAAGGCCGATCCCACTCTTCCACAACGTCTAACTTCATGGCGAATTCTCGGCATATTCTTCTTCTGTGCCTTCATGGTGTTCTCTTCATCCCATGCTACTGAGGAAGCAAATGCTCTTTTGAAGTGGAAAGCTAGCCTTGCAAACCAAAGCCAAGCTATCTTGTCCTCTTGGAATGGCACTGATCCTTGCAAACACTGGACAGGAATTATATGTGATGGTGAGTCCATGTCTGTCTCCACCATAAATGTTACAAGCTTTGAGATACAAGGTACACTTGACAGTCTCAACTTCTCTTCTTTCCATAAACTCAAGGTTTTAGATATTAGTTACAATGAATTTTTTGGAACTATTCCAAGCCAAATTGGTAACTTGTCCAGCATTTTCAAATTACATATGCATCATAATTTCTTGAGTGGTTCCATCCCACCAGAAATAGGAGTGTTGACTATTTTGAATGAGGTTTGTATTGATGTGAATAATCTCACCGGTAGAATCCCCAAAGAAATTGGGAACTTGAGGAATTTGGAAAAACTATCCCTTTACATGAATAATCTGTTTGGTTCTATTCCTCAAGAAATTGGAATGCTGAGTAATCTCATAGAGGTTGACTTGTCAAAGAACACATTATTAAAGGGAAGCATCCCTTCTTCAATAGGAAATTTGACCAAACTAAAATATCTTAACCTCTCTCAAAATAGTTTCTCAGGCATCATTCCTAGCGAACTTGGGAATCTCTGTTCTCTCATCAATTTAGATTTGTTTGAGAATAACTTGCATGGGCCTATACCACCCTTCATTGGAAACTTCACAAATCTCACCATATTAAATTTGTGGACCAACAGACTTTGGGGATCAATTCCAACCTCTATAGGAGAGATGGCCAGCATAGAAGAAATCAACCTTGCAAATAACTTTCTTTATGGACCTATTCCGACTACCATAGGAAATCTAACAAAGCTCAAGGTCCTAAATTTGAACATAAACAAACTTAATGGGAGCATTGCATTAGAGATGAACAACCTTACCAAGTTGAATGATTTACAACTTAGTGCAAATGACTTTACCGGCAATTTGCCACAACAAATTTGCCTTGGTGGGTCACTTGAGTATTTCACCACAGTTGCAAACATATTCACAGGTCCTGTTCCAACAACCTTGAAAAATTGCTCTAGCCTTATCAGACTTAGACTTGATAATAACCAACTTGTTGGAAATCTAACAAGTGATTTTGGCGTGTATCCAAATTTGAAATACATCGATTTGAGTGGCAATAAATTTTATGGCCACATTTCATCTTTGTGGGGGAAATGTCATAATCTTACAGCACTTAAGATTTCCAACAACAATCTTTCTGGTAGTATACCTGCAGAAATTGGAGAGGCAACCAATCTTGGGGAACTCAATGTCTCTTCAAATCACTTAACAGGAGAAATTACAAAAGAATTGGGGAAGATGATCTCACTGACTAGACTTTCTCTGAGCAATAATCAATTTTCTGGCAAGATTCCTCAAGAAATAGGATCATTGAATGAGCTTGAAGAATTGGAGTTGGCGGAAAATTGTTTCATTGGATCAATCCCTAAAGAGCTCGGAGGACTAAATAAGTTATGGCTATTGAGCTTGAGCAAAAATAAGTTAGAGGGAAGTATTCCCCTTGAATTTGGTCTCTTAAAAGCTTTGCAAGAACTTGACCTTAGCGTAAATATGTTAAGGGGAACAATACCAACAACCCTTGGAAGATTAATGATGTTGGAATATTTGAACCTGTCACATAATAATCTCTCTGGCATAATTCCATCCAATTTTGATGACATGACAAGCTTGACATCTGTGGACATATCATACAACCATTTAGAGGGACCTCTTCCAAACATTCTTGCCTTTCGAAATATTACATTTCAAGAAGTGAGGAATAATAGAGGTTTATGTGGCAATGTCACTACTTTAGAGGCTTGCAATAGACAAAGCATTAACATACCACATGGTCGTATGGACAAAAATGTGAAGCTATCAATGTTAGTATTTCTTTGTTTTGTGCCTCTAATTTTAGTAGTGGGTTCTTGTGTTTTGATTCAAAAGTCAAAGAAGAATGAAAGTCAAGAACAGGAAGAACTAGGTCTAAACATTTTCTCCATGTCCTGCTTTGATGGGGAAATCTTATATGAAAAAGTTATTAAAGCTACAGAGGATTTTAACGACAAGTATCTCGTTGGGATGGGAACACAAGGAAGTGTTTATAGGGCTGAGCTGGTTGAAGGTCAATTTTTTGCTGTGAAGAAGCTGCATCCTAGCTGTAATACAAATCCTTCCCATTTTAAAGCACTCTCAAATGAAGTTGAAGCATTGACAGAAATCAAACATCGTAACATAGTGAAATTACTTGGATTTTTTTTGAATCCATGCCTCTCATTCCTAGTTTATGAGTTTGTAGAAGGTGGTAGCTTGGATAAGATTTTAAAAAATGACAAGCAAGCAATAACATTTGGCTGGAATAAGAGAGTGAATGTTGTTAAAGGCGTGGTTGATGCATTATTCCACATACATCACAACATCTCATGTCCCATAATTCATCGTGACATATCAAGCAAAAATGTTTTGTTAGATTCAGAATATCAAGAAGCTCACATCATTGACTTTGGAATAGCTAAGTTTCTAAATGTTGACTCAAACAATATGACCTCATTTGCTGGAACCTTAGGCTATGCTGCTCCAGGTGAGGTCCTTTACTTTACAGCCAAACAACTTTAA 2766 0.3724 MVFKPQKADPTLPQRLTSWRILGIFFFCAFMVFSSSHATEEANALLKWKASLANQSQAILSSWNGTDPCKHWTGIICDGESMSVSTINVTSFEIQGTLDSLNFSSFHKLKVLDISYNEFFGTIPSQIGNLSSIFKLHMHHNFLSGSIPPEIGVLTILNEVCIDVNNLTGRIPKEIGNLRNLEKLSLYMNNLFGSIPQEIGMLSNLIEVDLSKNTLLKGSIPSSIGNLTKLKYLNLSQNSFSGIIPSELGNLCSLINLDLFENNLHGPIPPFIGNFTNLTILNLWTNRLWGSIPTSIGEMASIEEINLANNFLYGPIPTTIGNLTKLKVLNLNINKLNGSIALEMNNLTKLNDLQLSANDFTGNLPQQICLGGSLEYFTTVANIFTGPVPTTLKNCSSLIRLRLDNNQLVGNLTSDFGVYPNLKYIDLSGNKFYGHISSLWGKCHNLTALKISNNNLSGSIPAEIGEATNLGELNVSSNHLTGEITKELGKMISLTRLSLSNNQFSGKIPQEIGSLNELEELELAENCFIGSIPKELGGLNKLWLLSLSKNKLEGSIPLEFGLLKALQELDLSVNMLRGTIPTTLGRLMMLEYLNLSHNNLSGIIPSNFDDMTSLTSVDISYNHLEGPLPNILAFRNITFQEVRNNRGLCGNVTTLEACNRQSINIPHGRMDKNVKLSMLVFLCFVPLILVVGSCVLIQKSKKNESQEQEELGLNIFSMSCFDGEILYEKVIKATEDFNDKYLVGMGTQGSVYRAELVEGQFFAVKKLHPSCNTNPSHFKALSNEVEALTEIKHRNIVKLLGFFLNPCLSFLVYEFVEGGSLDKILKNDKQAITFGWNKRVNVVKGVVDALFHIHHNISCPIIHRDISSKNVLLDSEYQEAHIIDFGIAKFLNVDSNNMTSFAGTLGYAAPGEVLYFTAKQL 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1352 921 FunFam Leucine-rich repeat receptor protein kinase MSP1 699 815 - -
Prci8g1352 921 SUPERFAMILY L domain-like 267 365 - -
Prci8g1352 921 SMART LRR_typ_2 275 299 IPR003591 -
Prci8g1352 921 SMART LRR_typ_2 178 202 IPR003591 -
Prci8g1352 921 SMART LRR_typ_2 347 371 IPR003591 -
Prci8g1352 921 SMART LRR_typ_2 563 586 IPR003591 -
Prci8g1352 921 SMART LRR_typ_2 106 130 IPR003591 -
Prci8g1352 921 SMART LRR_typ_2 587 610 IPR003591 -
Prci8g1352 921 SMART LRR_typ_2 611 634 IPR003591 -
Prci8g1352 921 SMART LRR_typ_2 491 515 IPR003591 -
Prci8g1352 921 SMART LRR_typ_2 227 250 IPR003591 -
Prci8g1352 921 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Prci8g1352 921 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 374 911 - -
Prci8g1352 921 Gene3D Ribonuclease Inhibitor 40 159 IPR032675 -
Prci8g1352 921 Gene3D Ribonuclease Inhibitor 160 215 IPR032675 -
Prci8g1352 921 Gene3D Ribonuclease Inhibitor 216 345 IPR032675 -
Prci8g1352 921 SUPERFAMILY Protein kinase-like (PK-like) 724 911 IPR011009 -
Prci8g1352 921 ProSiteProfiles Leucine-rich repeat profile. 589 610 IPR001611 GO:0005515
Prci8g1352 921 FunFam Leucine-rich repeat receptor protein kinase EMS1 197 295 - -
Prci8g1352 921 SUPERFAMILY L domain-like 40 298 - -
Prci8g1352 921 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 348 662 - -
Prci8g1352 921 Pfam Leucine Rich Repeat 108 130 IPR001611 GO:0005515
Prci8g1352 921 Pfam Leucine Rich Repeat 229 251 IPR001611 GO:0005515
Prci8g1352 921 FunFam Nuclear pore complex protein NUP107 38 196 - -
Prci8g1352 921 Pfam Leucine rich repeat 565 624 IPR001611 GO:0005515
Prci8g1352 921 Pfam Leucine rich repeat 493 552 IPR001611 GO:0005515
Prci8g1352 921 ProSiteProfiles Protein kinase domain profile. 737 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1352 921 Gene3D Ribonuclease Inhibitor 346 661 IPR032675 -
Prci8g1352 921 ProSitePatterns Tyrosine protein kinases specific active-site signature. 861 873 IPR008266 GO:0004672|GO:0006468
Prci8g1352 921 Pfam Protein kinase domain 739 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1352 921 Gene3D Phosphorylase Kinase; domain 1 695 815 - -
Prci8g1352 921 SUPERFAMILY L domain-like 374 650 - -
Prci8g1352 921 Gene3D Transferase(Phosphotransferase) domain 1 816 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1352 Prci-Chr8 9615984 9619235 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1352 3 914 Receptor kinase-like Gene Family AT4G08850 43.730 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g1352 Pkinase 2.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1352 - - pcin:129318235 916.761