Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1350 ATGGTCTCATTGACAAGACTTTCTTTGAGAAACAATCAACTCTTTGGTAAGATTCCAATAGAAATAGGATCATTGGATCAACTTGAAAAACTAGAGTTGGCAAGAAACAACTTTAGCAGCTCAATCCCCAAAGAGCTCGTAAGACTTTCCAAGTTATTCCCCTTGAACTTGAGTAAAAATAAATTTGAAGCAAGCATTCCTATTGAGTTTGGTCAGTTACAAGCTCTGGAATATCTTGACCTTAGTGAGAATATATTGTGCGGAGCAATACCGAAAACACTTGGAACATTAAAGATGCTAGAAATTTTGAACATTTCGCATAATAATCTCTCTGTGAGGAATAACACAGGTTTATGTGGTAATGTCACTGGCTTAGATCTTTGCAATAAACATAACAATGACCCACAAAGTCATATAAACAAAACATCGAAGCTATTAGTATCGTTGTTTGTTTGTTTTGTGACTATAATTCTAGTAGTGGGTGGAATTTCCTATATTCTGATTCAAAAATCAAAGAGTGCAAAAGGCCACAATGGAAAATCTCTAACTCTCAATCTTTTCTCTGCTTGGTGTTTTGATGGGGAAATTTTGCATGAAAAGGTTGTTGAGGCTACTGAGGATTTTGATGACAAATATCTTATTGGGGTTGGAGCACAAGGAAGTGTTTATAAAGCTGAAATACTTGATGGTCAATTTTTTGCTGTGAAGAAACTTCATCCAAATTGTAATACAGATTTCTCTAATCTTAAAGCATTTTCAAGTGAAATTCAAGCATTGACAGAGATCAAACATCATAATGTAGTGAAGTTATTTGGGTTCTTTTCAAATACACATGTATCATTTCTTGTTTATGAGTTCCTTGATGGTGGTAGCTTGGATCATATTTTAAAAAATGAGATGCAAGCATCTACACTTGATTGGGATAAGAGGGTAATTGTTATTAGAGGTGTGGTTGATGCATTGTTCCACATGCACCATGGTCTCTCATGTCCTATGGTTTATCGCGACATATCAAGCAAAAATATTATGTTAGATTCAAAATATCAAGAAGCTCATATAACTGATTTTGGAGTAGTTAAGTTTCTAAAGCTTGACTTGAACAACATGACCTCATTCACTGGCACCTATGGCTATGCCACTCCAGCAAATGAGAAATGCGATGTTTACAGTTTTGGCGTTCTCACGTTAGAAATTCTAATGGGAAGACATCCAAGAGAGTTGATTTGTTCTTTGATAGAGATTCGAACATCTTACAATTCACTATTTAAGGATGTGTTGGATCAACGACTTCCTCCACCCTCAAGCCCAATTGTAGAGGGACTAATGCTTCATGCAAAAATTGCACTTGCTTGCTTGAATGAAAATCCACAATGGCGTTCAACCATGGAACAAGTATCTACGATTTGGCTCAATCTCAATGAGTGGGATACTATACTGAAGAAAACACAATCTGCCATGGTGGCATTAGGTGCTGATTCAAGCCCTCAGGTCTATGCTTTGCAAACAGAAGCCTTGCTTAAGCTCTTCAGACACAAAGAGGCACATATACTGTGGACTGTGGATTAA 1566 0.3659 MVSLTRLSLRNNQLFGKIPIEIGSLDQLEKLELARNNFSSSIPKELVRLSKLFPLNLSKNKFEASIPIEFGQLQALEYLDLSENILCGAIPKTLGTLKMLEILNISHNNLSVRNNTGLCGNVTGLDLCNKHNNDPQSHINKTSKLLVSLFVCFVTIILVVGGISYILIQKSKSAKGHNGKSLTLNLFSAWCFDGEILHEKVVEATEDFDDKYLIGVGAQGSVYKAEILDGQFFAVKKLHPNCNTDFSNLKAFSSEIQALTEIKHHNVVKLFGFFSNTHVSFLVYEFLDGGSLDHILKNEMQASTLDWDKRVIVIRGVVDALFHMHHGLSCPMVYRDISSKNIMLDSKYQEAHITDFGVVKFLKLDLNNMTSFTGTYGYATPANEKCDVYSFGVLTLEILMGRHPRELICSLIEIRTSYNSLFKDVLDQRLPPPSSPIVEGLMLHAKIALACLNENPQWRSTMEQVSTIWLNLNEWDTILKKTQSAMVALGADSSPQVYALQTEALLKLFRHKEAHILWTVD 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1350 521 FunFam Leucine-rich repeat receptor protein kinase MSP1 170 286 - -
Prci8g1350 521 Pfam Protein kinase domain 210 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1350 521 Pfam Leucine rich repeat 3 62 IPR001611 GO:0005515
Prci8g1350 521 PANTHER LEUCINE RICH REPEAT KINASE 2 3 467 - -
Prci8g1350 521 SUPERFAMILY Protein kinase-like (PK-like) 197 468 IPR011009 -
Prci8g1350 521 Gene3D Ribonuclease Inhibitor 2 128 IPR032675 -
Prci8g1350 521 ProSiteProfiles Protein kinase domain profile. 208 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1350 521 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 20 113 - -
Prci8g1350 521 Gene3D Phosphorylase Kinase; domain 1 170 286 - -
Prci8g1350 521 SUPERFAMILY L domain-like 3 137 - -
Prci8g1350 521 Gene3D Transferase(Phosphotransferase) domain 1 288 469 - -
Prci8g1350 521 ProSitePatterns Tyrosine protein kinases specific active-site signature. 332 344 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1350 Prci-Chr8 9572161 9577151 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1350 4 382 Receptor kinase-like Gene Family AT4G08850 39.019 2.92e-78 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g1350 Pkinase 1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1350 - - pcin:129317265 1041.95