Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1348 ATGAAGATAAAAAACCATGATAGAGAAGCTCTAGCTCAAAATCTGTTCTCCTTATGGTGTTTTGATAGGGAAGTTGTTCATGAAAAGGTTGTTGTGGCAACAGAGGGTTTTAATGACAAATATCTCATCGGGATGGGAGGACAAGGAAGTGTTTATAAGGCTGAGTTACTCGCTGGTCAATTTTTTGCTGTGAAGAAACTTCATCCTGATAGTGATAGAGATTTCTCCAACTTCAAAGCATTTTCAAGAGAAATTCAAGCATTGACAGAAATCAAACACCGTAACATTGTGAAGTTATTTGGGTTCTATTCAAATTCACGACTCTTCTACTTGGTTTATGAGTTCTTAGAAGGTGGTAGCTTGGAAAAGAATCTAAAAAATGATAATCAAGCAGCTGCACTTGATTGGAATAGGAGGTTGAACATTGTTAGAGGTGTGGCTTCCGGATTATTCCACATGCATCATGGTCTCTCATGTCCCATAATTCATCGTGACATATCGAGCAAGAATATTCTCTTAGATTCAGAATATCAAGAAGCTCACATTATTGACTTTGGAATAGCTAAGTTTCTAAAACTTGATGCAAGCAGCATGACCTCATTTATTGGCACATTTGGCTATGCTGCTCCAGAGATTGCTTTAACAATGCAAGCAAATGAGAAATGTGATGTTTATAGCTTTGGAGTCCTTACATTGGAAATCCTAATGGGAAAGCATCCTGGTGAGTTTATTTGTCCTATGACAGAGATTCCAACATCTTATGATTTTACACCCTTTAAGTATATATTGGACCAGCGACTTCCGCCACCGTCAAATCTAGTTGTTAAGGAGGTAATGTTGATTGCAAAAATAGCACTTGCATGCTTGAATGAAAATCCACGATGCCGTCCAACCATAGAACAAGTATCTTCAGAACTTACAAGGCCAAGCCCTTATTCTGTGAACCAGTTTGACAACATCACACTCCGACAACTGATGAGAGTTTAA 987 0.382 MKIKNHDREALAQNLFSLWCFDREVVHEKVVVATEGFNDKYLIGMGGQGSVYKAELLAGQFFAVKKLHPDSDRDFSNFKAFSREIQALTEIKHRNIVKLFGFYSNSRLFYLVYEFLEGGSLEKNLKNDNQAAALDWNRRLNIVRGVASGLFHMHHGLSCPIIHRDISSKNILLDSEYQEAHIIDFGIAKFLKLDASSMTSFIGTFGYAAPEIALTMQANEKCDVYSFGVLTLEILMGKHPGEFICPMTEIPTSYDFTPFKYILDQRLPPPSNLVVKEVMLIAKIALACLNENPRCRPTIEQVSSELTRPSPYSVNQFDNITLRQLMRV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1348 328 SUPERFAMILY Protein kinase-like (PK-like) 23 304 IPR011009 -
Prci8g1348 328 Gene3D Transferase(Phosphotransferase) domain 1 116 320 - -
Prci8g1348 328 Gene3D Phosphorylase Kinase; domain 1 3 115 - -
Prci8g1348 328 PANTHER LEUCINE RICH REPEAT KINASE 2 12 310 - -
Prci8g1348 328 FunFam Leucine-rich repeat receptor-like protein kinase 116 316 - -
Prci8g1348 328 Pfam Protein kinase domain 38 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1348 328 ProSitePatterns Tyrosine protein kinases specific active-site signature. 161 173 IPR008266 GO:0004672|GO:0006468
Prci8g1348 328 FunFam Leucine-rich repeat receptor protein kinase MSP1 1 115 - -
Prci8g1348 328 ProSiteProfiles Protein kinase domain profile. 37 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1348 Prci-Chr8 9551900 9553089 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1348 2 210 Receptor kinase-like Gene Family AT4G08850 50.000 7.42e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g1348 Pkinase 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1348 - - pcin:129317095 662.529