Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1346 ATGCATCATGGTCTCTCATGTCCAGTAATCCATCGTGACATATCAAGCAAGAATATTTTGTTAGACTTCGAATATCAAGAAGCTCACATCACCGATTTTGGAATAGCTAAGTTCTTAAATCTTGACTCAAACAACATGACCTCATTTGTTGGCACCTTTGGCTATGCTGCTCCAGAGATTGCTTTCACCATACAAGCAAATGAGAAATGTGATGTCTACAGTTTTGGAGTTCTTGCATGGGAAATCTTATTGGGAAGGCATCCGAGTGATCTTGTTTGTTCTTTGATAGAGATTCCTACATCTTATAAGTTGCCATTAAAGGATGTTGTAGACAAACGCCTTCCACCACCCACAAACCTAGTTGCTGATGAAGTGATATCAATTGCAAAATTAGCACTTGCTTGCTTGAATGAAAACCCATGTTCTCGTCCAACTATGGAACATGTATCTACGAAGCGTATGAAGAGAAAGCCTCATTTAGCAGACCAGTTTGACACCATCACACTAGGAAAACTTATGATGCAGGTGGATCTTAGTCATTCAATCACAACACTGGACCAAATGATGACACGTGGCATCATGAATACATATGAAATTGAAGAGACGTAA 609 0.3941 MHHGLSCPVIHRDISSKNILLDFEYQEAHITDFGIAKFLNLDSNNMTSFVGTFGYAAPEIAFTIQANEKCDVYSFGVLAWEILLGRHPSDLVCSLIEIPTSYKLPLKDVVDKRLPPPTNLVADEVISIAKLALACLNENPCSRPTMEHVSTKRMKRKPHLADQFDTITLGKLMMQVDLSHSITTLDQMMTRGIMNTYEIEET 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1346 202 SUPERFAMILY Protein kinase-like (PK-like) 3 161 IPR011009 -
Prci8g1346 202 PANTHER LEUCINE RICH REPEAT KINASE 2 1 157 - -
Prci8g1346 202 Gene3D Transferase(Phosphotransferase) domain 1 1 170 - -
Prci8g1346 202 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1346 202 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Prci8g1346 202 Pfam Protein kinase domain 6 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1346 Prci-Chr8 9519043 9520348 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1346 1 149 Receptor kinase-like Gene Family AT5G49660 40.506 2.85e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g1346 Pkinase 4.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1346 - - pcin:129317960 410.994