Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1341 ATGGCGTCTAACTCCCAAAAGGCCCCTTTCACTCTTCCATTAGTAATCTTGTTTTGCATCTATGTGATGTTCTCTTCATCTCTTGTTGCTATTGAGGAAGCAAATGCTCTCTTAAATTACTGGAAAGGAATTACTTGTGATGAATCCATGTCCATCTCCACCATAAATCTCACAGGTATGGGAATACAAGGTATACTTCACAGTCTCAACTTCTCATCTTTCCCTAAACTCCAGGTTTTTGACATCAGTGACAATGAGTTTTATGGAAGTATTCCCAGCCAAATTGGTAACTTGTCTAGTATTCATACACTGTATATAGATCATAATTTCTTGAATGGTTTCATCCCTCCAGAAATAGGGGTGTTAACTACTCTAAATATGCTTGGAATTGGTGAGAATAATCTCAATGGGCTTATTCCCAAAGAAATTGGGAACTTAAGGAATCTGGAAATACTATCCTTTTACTCAAATCATTTGTCTGGTCCCATTCCTCCTGAAATTGGGAATCTCTATTCTCTCACCACATTGGTGTTGTCAACAAATAATTTGTATGGGCCAATACCACACTTCATTGGAAACTTCACAAATCTCGCTTTGTTAGACTTGTCAACCAATAGACTTACGGGATCAATCCTATCCTCTCTAGGAGACATGGTCAATTTACAAAACCTCTACCTTAGGAATAACTCTGATCTTTCTGGACCTATTCCTTGTGAATTTGAGAATCTCTATTCTCTCATTGAATTAGATTTTTCAGTAAACAATTTATATGGGCCAATACCATACTTCATTAGAAACTTCACAAATCTCACTTTGTTAGACTTATCGGCCAATAGACTTGTGGGATCTATCCCATCCTCTCTTGGAGACTTGATCAGTTTACAAAACCTCTACCTTGGGGATAACTCTTATCTTTCTGGGCCTATTCCTTGTGAATTCGAGAAGCTCTATTCTCTCATTAAATTGGATTTGTCAGTAAACAATTTGTCTGGGCCAATACTACACTTCATTGGAAACTTCACAAATCTCACTTTGTTAAGCTTGGAGGTCAACAAACTTTCAGGATCAATCCCATCCACTCTAGGAGACTTGGTCAGTTTACAAAACCTCTACCTTAGGAATAATGCTCTTTCTATGCTTATTCCATCTAACATAGGAAACTTGACTGAACTACAAATTCTTGATCTATCTCAAAATAGATTATATGGCCCAATACTATCCTTCTTTGGAAACCTCACAAAACTCATTGCATTGCAATTGGGGTACAACAAACTTTGGGGATCAATTCCATCTTCTATAGGAAACTTGAATGACTTAACTGGCCATTTACCAAAAAAGTTTTGTCTTGGAGGATCACTTGAATATATTGCTGCTTCTGCAAACAAATTCACCGATCCAATTCCAAAAACCTTGAAAAATTGCTCTAGCCTCATCAGACTCTTTCTTGATAATAACCAATTGGTTGGGAACATAAGTGATTTTGGTGTGCTTCCAAATTTGAAATACATTGATTTGAGTGGCAATAAATTGTATGGTCACATTTCATCATTATGGGGAAAGTGTCAAAACCTTGCAACACTTAAGATTTCCAACAACAATCTTTCTGGTCATATACCACCAAAATTGGGAGAGGCAACTAATCTCGGGAAACTCAATCTCTCTTCAAATCACTTGACAGGTGAAATTCCAAAAGAATTGGGAAAAATGGTCAAATTGACTAGACTTTCTTTGAGCAACAATCAACTTTTCGATCAGATTCCAAAAGAAATAGGATCATTGAATCAACTTAAAAAATTGGAATTGGCAGCAAACAATTTTACCAGCTCAATCCCAAAACTCAAGGGACTTTCCAAGTTATTTCTCTTGAACTTGAGCAAAAATAAATTTGAGGCAAGCATTCCTATTGAGTTTGGTCAGTTACAAGCTCTGGGATATCTTGACCTTAGTGAGAATATGTGTGTGTGGAGCAATACCGAAAACACTTGGAACATTAAAGATGTTAGAAATTTTAACATTTCACATAATAATCTCTCTGGCACCTTTCCGTCCAACACAGGTTTATGTGGTAATGTCACTGGCTTGGAGCTTTGTAACAAATATAACAATGACCCACAAGGTCATATAAACAAAACAGCAAAGCTATTAGTGTCATTGCTCGTTTGTTTCGTGACCATAATTCTGGTGGTGGGTGAAATTTCCTATATTCTGATTCAAAAATCAAAGAAAAGAAAAGGTCATGATGGAGAAGCAATAACTCTCAATCTTTTCTCTATTTTGGGTTTTGATGGAGAACTTTTGCGTGAAAAAGTTGTTGAGGCTACGGAGGATTTTGAAGACAAATATCTCATTAGAGTTGGAGCACAAGGAAGTGTATATAAAGCTGAAATACTTGACGGTCAATTTTTTGCTGTGAAGAAGCTTCATCCAAATTGTAACGCACATTTCTCTAATCTTAAAGCATTTTCAAGTGAAATTAAAGCATTGACAGAGATCAAACATCGCAATGTAGTGAAGTTACTTGCATTCTTTTCAAAACCACGTATATCATTTCTTGTTTACGAGTTCCTTGACAGTGGTAGCTTGGATCATATTTTAACAAATGAGATACAAGCATCTACACTTGATTGGGATAAGAGGGTAATTGTTATTAGAGGCGTGGTTGATGCATTATTCCACATGCACCATGGTCTCTCATGTCCTATAATTCATCGTGACATATCAAGCAAAAATATTTTGTTAGATTCAGAATATCAAGAAGCTCATATAACTGATTTTGGAGTAGCCAAGTTTCTAAAGCTTGACTCAAATAACACAACCTCATTTGTTGGCACCTATGGCTATACCGCTCCAGAGATAGCTTTTACCATGCAAGCAAATGAGAAATGCGATGTTTATAGTTTTGGTGTTCTTACTTTAGAAATTCTAATGGGAAGACATCCAGGAGAGTTGATTTGTTCTTTGACAGAGATTCCATCCTATGATTTGCCATTTAAGGATGTGTTGGATCAACGACTTCCTCCACCCTCAAACTCAATTGTCAAGGAAGTAATGTTGATGGCAAAAATAGCACTTGCTTGCTTGAATGAAAATCCACAATGCCGTCCAACAATGGAACAAGTATATATGGAACTTGTAAGGCCTAAACCTTATTTAGCAAGCCAGTTTGACGACATCACACTAGGACAACTCATGAAAGATTAA 3201 0.3661 MASNSQKAPFTLPLVILFCIYVMFSSSLVAIEEANALLNYWKGITCDESMSISTINLTGMGIQGILHSLNFSSFPKLQVFDISDNEFYGSIPSQIGNLSSIHTLYIDHNFLNGFIPPEIGVLTTLNMLGIGENNLNGLIPKEIGNLRNLEILSFYSNHLSGPIPPEIGNLYSLTTLVLSTNNLYGPIPHFIGNFTNLALLDLSTNRLTGSILSSLGDMVNLQNLYLRNNSDLSGPIPCEFENLYSLIELDFSVNNLYGPIPYFIRNFTNLTLLDLSANRLVGSIPSSLGDLISLQNLYLGDNSYLSGPIPCEFEKLYSLIKLDLSVNNLSGPILHFIGNFTNLTLLSLEVNKLSGSIPSTLGDLVSLQNLYLRNNALSMLIPSNIGNLTELQILDLSQNRLYGPILSFFGNLTKLIALQLGYNKLWGSIPSSIGNLNDLTGHLPKKFCLGGSLEYIAASANKFTDPIPKTLKNCSSLIRLFLDNNQLVGNISDFGVLPNLKYIDLSGNKLYGHISSLWGKCQNLATLKISNNNLSGHIPPKLGEATNLGKLNLSSNHLTGEIPKELGKMVKLTRLSLSNNQLFDQIPKEIGSLNQLKKLELAANNFTSSIPKXLKGLSKLFLLNLSKNKFEASIPIEFGQLQALGYLDLSENMCVWSNTENTWNIKDVRNFNISHNNLSGTFPSNTGLCGNVTGLELCNKYNNDPQGHINKTAKLLVSLLVCFVTIILVVGEISYILIQKSKKRKGHDGEAITLNLFSILGFDGELLREKVVEATEDFEDKYLIRVGAQGSVYKAEILDGQFFAVKKLHPNCNAHFSNLKAFSSEIKALTEIKHRNVVKLLAFFSKPRISFLVYEFLDSGSLDHILTNEIQASTLDWDKRVIVIRGVVDALFHMHHGLSCPIIHRDISSKNILLDSEYQEAHITDFGVAKFLKLDSNNTTSFVGTYGYTAPEIAFTMQANEKCDVYSFGVLTLEILMGRHPGELICSLTEIPSYDLPFKDVLDQRLPPPSNSIVKEVMLMAKIALACLNENPQCRPTMEQVYMELVRPKPYLASQFDDITLGQLMKD 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1341 1067 PRINTS Leucine-rich repeat signature 197 210 - -
Prci8g1341 1067 PRINTS Leucine-rich repeat signature 388 401 - -
Prci8g1341 1067 FunFam Leucine-rich repeat receptor protein kinase EMS1 165 248 - -
Prci8g1341 1067 Gene3D Ribonuclease Inhibitor 157 218 IPR032675 -
Prci8g1341 1067 Gene3D Ribonuclease Inhibitor 219 292 IPR032675 -
Prci8g1341 1067 FunFam Leucine-rich repeat receptor protein kinase EMS1 261 357 - -
Prci8g1341 1067 Gene3D Transferase(Phosphotransferase) domain 1 857 1055 - -
Prci8g1341 1067 ProSitePatterns Tyrosine protein kinases specific active-site signature. 902 914 IPR008266 GO:0004672|GO:0006468
Prci8g1341 1067 Gene3D Ribonuclease Inhibitor 25 156 IPR032675 -
Prci8g1341 1067 Gene3D Ribonuclease Inhibitor 439 716 IPR032675 -
Prci8g1341 1067 Gene3D Ribonuclease Inhibitor 293 438 IPR032675 -
Prci8g1341 1067 SMART LRR_sd22_2 497 526 - -
Prci8g1341 1067 SMART LRR_sd22_2 146 172 - -
Prci8g1341 1067 SMART LRR_sd22_2 569 588 - -
Prci8g1341 1067 SMART LRR_sd22_2 388 414 - -
Prci8g1341 1067 SMART LRR_sd22_2 267 293 - -
Prci8g1341 1067 SMART LRR_sd22_2 194 217 - -
Prci8g1341 1067 SMART LRR_sd22_2 593 619 - -
Prci8g1341 1067 FunFam Leucine-rich repeat receptor protein kinase EMS1 358 436 - -
Prci8g1341 1067 Pfam Leucine rich repeat 595 652 IPR001611 GO:0005515
Prci8g1341 1067 Pfam Leucine rich repeat 523 582 IPR001611 GO:0005515
Prci8g1341 1067 Pfam Protein kinase domain 786 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1341 1067 FunFam Nuclear pore complex protein NUP107 22 164 - -
Prci8g1341 1067 ProSiteProfiles Protein kinase domain profile. 778 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1341 1067 FunFam Leucine-rich repeat receptor-like protein kinase TDR 437 716 - -
Prci8g1341 1067 SMART LRR_typ_2 497 521 IPR003591 -
Prci8g1341 1067 SMART LRR_typ_2 267 291 IPR003591 -
Prci8g1341 1067 SMART LRR_typ_2 617 641 IPR003591 -
Prci8g1341 1067 SMART LRR_typ_2 364 388 IPR003591 -
Prci8g1341 1067 SMART LRR_typ_2 74 98 IPR003591 -
Prci8g1341 1067 SMART LRR_typ_2 569 593 IPR003591 -
Prci8g1341 1067 SMART LRR_typ_2 412 436 IPR003591 -
Prci8g1341 1067 SMART LRR_typ_2 146 170 IPR003591 -
Prci8g1341 1067 FunFam MDIS1-interacting receptor like kinase 2 857 1050 - -
Prci8g1341 1067 SUPERFAMILY RNI-like 404 699 - -
Prci8g1341 1067 SUPERFAMILY RNI-like 55 409 - -
Prci8g1341 1067 SUPERFAMILY Protein kinase-like (PK-like) 768 1045 IPR011009 -
Prci8g1341 1067 FunFam Leucine-rich repeat receptor protein kinase MSP1 741 856 - -
Prci8g1341 1067 Gene3D Phosphorylase Kinase; domain 1 750 856 - -
Prci8g1341 1067 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 389 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1341 Prci-Chr8 9414104 9417775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1341 169 955 Receptor kinase-like Gene Family AT4G08850 39.408 1.44e-170 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci8g1341 Pkinase 9.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1341 - - pcin:129317259 2094.7