Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1330 ATGAATAACAATTCCCAGAGAACCACCACCGTTCGACAGTACCACAAATCCGAGCTTCCCCGCCTCCGGTGGACGCCGGAACTCCATCAACGCTTTGTTGAAGCTGTTGAAACTCTCGGTGGCAAAGACAAGGCAACACCGAAGCGTATTTTGCAGATGATGCGTGTGAAAGGATTGAGAATCTCGCACGTTAAAAGCCATCTTCAGATGTACAGAAACATGAAGAGGCAATATTCTATAGTTCATCATCATCAATCACATGAAGGAAAAGCTCGTGCTCATGATCTCCATATCTGCTCCATTTCCTTGCCCCAAAGATCGCCAAGAGCAAATGTCTTAGCATCAACATATGAACTGCATCAATTACATATGAAAGGGCTTTCACATAGTAGTGAAGAAATTCATTATGATCTCAATCAGGATCCTTATACAACGACAAGTACAGAAAATAGCGTGACAGCTCCACTTGGTGACCTCTCACTCTCTTTTGATCACACACATTTGTTTCCAGTGATCAATATCATGCACAGTGTGCAAGATGAAGAAGAAGAAGAAGACGAAGACGACGAAGACGAAGACGAAGACGAAGACGAGGATCAAGTAGTTCATGACTCTACTAGTTCAACACAGTCTCTCGGAGGGAATTACATAAACTTAGACCTAACTATTTGA 672 0.4286 MNNNSQRTTTVRQYHKSELPRLRWTPELHQRFVEAVETLGGKDKATPKRILQMMRVKGLRISHVKSHLQMYRNMKRQYSIVHHHQSHEGKARAHDLHICSISLPQRSPRANVLASTYELHQLHMKGLSHSSEEIHYDLNQDPYTTTSTENSVTAPLGDLSLSFDHTHLFPVINIMHSVQDEEEEEDEDDEDEDEDEDEDQVVHDSTSSTQSLGGNYINLDLTI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1330 223 MobiDBLite consensus disorder prediction 179 223 - -
Prci8g1330 223 FunFam Myb family transcription factor 18 76 - -
Prci8g1330 223 Gene3D - 19 77 - -
Prci8g1330 223 MobiDBLite consensus disorder prediction 179 201 - -
Prci8g1330 223 MobiDBLite consensus disorder prediction 204 223 - -
Prci8g1330 223 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
Prci8g1330 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
Prci8g1330 223 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 74 IPR006447 GO:0003677
Prci8g1330 223 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 121 IPR046955 GO:0003700
Prci8g1330 223 SUPERFAMILY Homeodomain-like 20 76 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1330 Prci-Chr8 9247022 9254582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1330 6 75 G2-like Transcription Factor Family AT2G42660 65.714 3.85e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci8g1330 Myb_DNA-binding 4.1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1330 - - pcin:129318851 420.239