Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1325 ATGCTTACTTTTGTCATTGCAAGATTTACTTTAATCCCCTGCCAGAAGAGGACCCATCTTGTTTCCCTCCATCACAATGTTTCCCACATTTTCAATTCCTTTTCTTCAGTTTCGAAAGTGTCTGAATCAAATCAACGAAAAGGAAAATCTGGAGAACATGATTCTTTTACTTTTTATTATCTCTTAGACTCACTGGACATGCCTTCCGAAGCAGCTATTGAAGTATCCAAACGGGTTAAACTAAAAGGCTCTGATAAACCTAACTTGGTGCTTAATCTATTTAGGACTTATGGATTCTCAGATGCCCAGATCTCTAAAATTGTGGAAAAGTGTCCACGCGCCCTTTTAGCGAAGCCTGAAGCGACACTTTCGCCGAAGCTAAGGTTTTTCCGGTCTATAGGGTTTTCAAGGTCTGAACTGCCAGAACTCATCTTATCAAATTGTGAAAACTTATTCTTGAGCTTGAAGAAAAATATAATCCCCCGTTATGAGGTCATTAAGAGCGTACTTGGTGACGATGATCACGCCAATAGGGCTTTTAAACAATGGGGTTGGCACAATAAGGATCCAACGAATTTACTTTCAAACATAAAGGTGTTGAGAGAACATGGAGTGCCTCAGTCTTCTGTCTCTCTACTGGTTACTCATTATGCAAGGGCCGCGCTTATAGATCCGGCAAAGTTTATTGAACATGTCAAGTTTGCAAAGGAGATAGGAATCGATCCTTCCAAGGCTGCGTTCATCCAGGCACTTTCTGTGTTAGCAATCACGAAGAAATCTACTTGGGAGTCGAGGCTGGATATCTATGAGACGTACGGCTTGTCCAAGGATGCCACTCTTTCAGCATTCAGGAAGTTTCCAAATTTCATGCGGCTGTCGGAAGATAAAATCACAAGCACAATGAAGTTTCTTGTGGAAGAAATGGGTTTGCCATTGGTAGATATTGTTAGTTGCCCCGCATTTCTTGGCTATAGCTTGAAGCAAAGGATAATTCCTAGATTCTCGGTTTTTAAAATTTTGAAAACTAATGGTTCGATAAAAAGGGGCCCGTCCTTCTCTTCCCTGGTCACAATGAGTGAAACAAAATTTCTGGAAAAATTTGTGATCCCGTTTCAGGAAAGCGTTCCTCAGCTATTGGACATTTATAAAAGCTGTTCTTGA 1161 0.4083 MLTFVIARFTLIPCQKRTHLVSLHHNVSHIFNSFSSVSKVSESNQRKGKSGEHDSFTFYYLLDSLDMPSEAAIEVSKRVKLKGSDKPNLVLNLFRTYGFSDAQISKIVEKCPRALLAKPEATLSPKLRFFRSIGFSRSELPELILSNCENLFLSLKKNIIPRYEVIKSVLGDDDHANRAFKQWGWHNKDPTNLLSNIKVLREHGVPQSSVSLLVTHYARAALIDPAKFIEHVKFAKEIGIDPSKAAFIQALSVLAITKKSTWESRLDIYETYGLSKDATLSAFRKFPNFMRLSEDKITSTMKFLVEEMGLPLVDIVSCPAFLGYSLKQRIIPRFSVFKILKTNGSIKRGPSFSSLVTMSETKFLEKFVIPFQESVPQLLDIYKSCS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1325 386 Gene3D Transcription termination factor 3, mitochondrial 64 184 IPR038538 -
Prci8g1325 386 Gene3D Transcription termination factor 3, mitochondrial 185 374 IPR038538 -
Prci8g1325 386 SMART mt_12 312 343 IPR003690 GO:0003690|GO:0006355
Prci8g1325 386 SMART mt_12 141 173 IPR003690 GO:0003690|GO:0006355
Prci8g1325 386 SMART mt_12 280 311 IPR003690 GO:0003690|GO:0006355
Prci8g1325 386 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Prci8g1325 386 FunFam Mitochondrial transcription termination factor-like 155 375 - -
Prci8g1325 386 Pfam mTERF 91 304 IPR003690 GO:0003690|GO:0006355
Prci8g1325 386 Pfam mTERF 258 364 IPR003690 GO:0003690|GO:0006355
Prci8g1325 386 PANTHER CGI-12 PROTEIN-RELATED 56 370 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1325 Prci-Chr8 9219417 9222557 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci8g1325 mTERF 1.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1325 K15031 - qsa:O6P43_021047 303.138