Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1322 ATGCCTTCCGAAGCAGCTATTGAAGTATCCAAACGGGTTAAACTAAAAGGCTCTGATAAACCTAACTTGGTGCTTAATCTATTTAGGACTTATGGATTCTCAGATGCCCAGATCTCTAAAATTGTGGAAAAGTGTCCACGCGCCCTTTTAGCGAAGCCTGAAGCGACACTTTCGCCGAAGCTAAGGTTTTTCCGGTCTATAGGGTTTTCAAGGTCTGAACTGCCAGAACTCATCTTATCAAATTGTGAAAACTTATTCTTGAGCTTGAAGAAAAATATAATCCCCCGTTATGAGGTCATTAAGAGCGTACTTGGTGACGATGATCACGCCAATAGGGCTTTTAAACAATGGGGTTGGCACAATAAGGATCCAACGAATTTACTTTCAAACATAAAGGTGTTGAGAGAACATGGAGTGCCTCAGTCTTCTGTCTCTCTACTGGTTACTCATTATGCAAGGGCCGCGCTTATAGATCCGGCAAAGTTTATTGAACATGTCAAGTTTGCAAAGGAGATAGGAATCGATCCTTCCAAGGCTGCGTTCATCCAGGCACTTTCTGTGTTAGCAATCACGAAGAAATCTACTTGGGAGTCGAGGCTGGATATCTATGAGACGTACGGCTTGTCCAAGGATGCCACTCTTTCAGCATTCAGGAAGTTTCCAAATTTCATGCGGCTGTCGGAAGATAAAATCACAAGCACAATGAAGTTTCTTGTGGAAGAAATGGGTTTGCCATTGGTAGATATTGTTAGTTGCCCCGCATTTCTTGGCTATAGCTTGAAGCAAAGGATAATTCCTAGATTCTCGGTTTTTAAAATTTTGAAAACTAATGGTTCGATAAAAAGGGGCCCGTCCTTCTCTTCCCTGGTCACAATGAGTGAAACAAAATTTCTGGAAAAATTTGTGATCCCGTTTCAGGAAAGCGTTCCTCAGCTATTGGACATTTATAAAAGCTGTTCTTGA 963 0.4174 MPSEAAIEVSKRVKLKGSDKPNLVLNLFRTYGFSDAQISKIVEKCPRALLAKPEATLSPKLRFFRSIGFSRSELPELILSNCENLFLSLKKNIIPRYEVIKSVLGDDDHANRAFKQWGWHNKDPTNLLSNIKVLREHGVPQSSVSLLVTHYARAALIDPAKFIEHVKFAKEIGIDPSKAAFIQALSVLAITKKSTWESRLDIYETYGLSKDATLSAFRKFPNFMRLSEDKITSTMKFLVEEMGLPLVDIVSCPAFLGYSLKQRIIPRFSVFKILKTNGSIKRGPSFSSLVTMSETKFLEKFVIPFQESVPQLLDIYKSCS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1322 320 PANTHER CGI-12 PROTEIN-RELATED 4 304 IPR003690 GO:0003690|GO:0006355
Prci8g1322 320 SMART mt_12 246 277 IPR003690 GO:0003690|GO:0006355
Prci8g1322 320 SMART mt_12 75 107 IPR003690 GO:0003690|GO:0006355
Prci8g1322 320 SMART mt_12 214 245 IPR003690 GO:0003690|GO:0006355
Prci8g1322 320 SMART mt_12 39 70 IPR003690 GO:0003690|GO:0006355
Prci8g1322 320 Gene3D Transcription termination factor 3, mitochondrial 3 119 IPR038538 -
Prci8g1322 320 Gene3D Transcription termination factor 3, mitochondrial 120 308 IPR038538 -
Prci8g1322 320 FunFam Mitochondrial transcription termination factor-like 89 309 - -
Prci8g1322 320 Pfam mTERF 192 298 IPR003690 GO:0003690|GO:0006355
Prci8g1322 320 Pfam mTERF 25 238 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1322 Prci-Chr8 9219414 9222557 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci8g1322 mTERF 1.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1322 K15031 - gmx:100775533 281.182