Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1321 ATGCTTACTTATCTCATTGCAAGATTTTCTTCGCTCTCCTGCGAGAGGACGACCCAACTTGTTTTCCTCTATCACAATGCTTCCCACATTTTCAAATCCTTTTCTTCAGTGTCGAAAGTGTCTGAATCAAATCAACGAAAAGGAAAATCAAGAGAAGAGGAATCATATACTGTTTCTTATCTCACAGACTCATTGGGCATGTCCTCCCAATTCGCGATGAAAGTATCCAAACGGGTTAAGCTAGCAGGGCAGGATAAACCTGACTCAGTACAAAATCTTTTTAGGAGTTACGGATTCTCAGATTCCCAGATATCTAAACTTGTGGAAAAGATTCCACGAGTCCTTTTTGCAAAGCCTGAGAAGACCCTTTCGCCCAAGCTAAGGTATTTACAGTCTATAGGGTTTTCAAGATCCGAACTGCCAGAACTCTTCATACATAACCCTAGAATCTTAACTATGAGCTTGAAGAAAACTATCATTCCCCGTTATGAGGCCCTTAAGAGCATAGTTGATGACGATAAAGCACGTAGAGCATTTAAACGCTGGGGTAGGTACCATAAGGATTCAACGATTTTAGTTTCAAACTTGAAGGTCTTGAGACAACATGGAGTGCCTCAATCTTCTGTCTCTCGAATAGTTGCTCATTCTGTAGGGGCAGCACTTACAAAGCCGACCAAGTTTATTGAACATGTAAAGTTTGCAAAGGAAATAGGCATCGATCCTTCCAAGTCTGCGTTCATCCAGGCAGTTTCTGTGTTAGCAACGACAAACAAATTGACTTGGGAGTCGAAGCTGGATATCTATGAGAGGTGTGGCTGGTCCAGGGATGTCACTCTTTCAGCATTCAGGAAGTTTCCAAATTGTATGATGCTGTCGGAGGATAAAATCACAAGCACAATGAAGTTTCTTGTGGATGACATGGGTTTGTCATTGGTAGATATTGTTAATTGCCCTGTATTTCTTGGCTACAGCTTGGAGCAAAGGATTATTCCTAGATGCTCAGTTTTTAAAATTTTGAAAAATAATGGTTTGATAAAAAGTGACATGTCCTTGTGTTCCTTGATAACATTAAGTGAAACAAAATTTCTGGAAAAATTTGTGATCCCGTTTCAGGAAAGTGTTCCTAAGCTATTGGAGATTTATGGAAGTCGTTCTTGA 1158 0.4016 MLTYLIARFSSLSCERTTQLVFLYHNASHIFKSFSSVSKVSESNQRKGKSREEESYTVSYLTDSLGMSSQFAMKVSKRVKLAGQDKPDSVQNLFRSYGFSDSQISKLVEKIPRVLFAKPEKTLSPKLRYLQSIGFSRSELPELFIHNPRILTMSLKKTIIPRYEALKSIVDDDKARRAFKRWGRYHKDSTILVSNLKVLRQHGVPQSSVSRIVAHSVGAALTKPTKFIEHVKFAKEIGIDPSKSAFIQAVSVLATTNKLTWESKLDIYERCGWSRDVTLSAFRKFPNCMMLSEDKITSTMKFLVDDMGLSLVDIVNCPVFLGYSLEQRIIPRCSVFKILKNNGLIKSDMSLCSLITLSETKFLEKFVIPFQESVPKLLEIYGSRS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1321 385 PANTHER CGI-12 PROTEIN-RELATED 57 369 IPR003690 GO:0003690|GO:0006355
Prci8g1321 385 Gene3D Transcription termination factor 3, mitochondrial 56 185 IPR038538 -
Prci8g1321 385 Gene3D Transcription termination factor 3, mitochondrial 186 373 IPR038538 -
Prci8g1321 385 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Prci8g1321 385 SMART mt_12 311 345 IPR003690 GO:0003690|GO:0006355
Prci8g1321 385 SMART mt_12 279 310 IPR003690 GO:0003690|GO:0006355
Prci8g1321 385 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Prci8g1321 385 SMART mt_12 244 274 IPR003690 GO:0003690|GO:0006355
Prci8g1321 385 SMART mt_12 28 68 IPR003690 GO:0003690|GO:0006355
Prci8g1321 385 FunFam Mitochondrial transcription termination factor-like 155 374 - -
Prci8g1321 385 Pfam mTERF 92 301 IPR003690 GO:0003690|GO:0006355
Prci8g1321 385 Pfam mTERF 258 363 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1321 Prci-Chr8 9213059 9214216 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci8g1321 mTERF 1.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1321 K15031 - qsa:O6P43_021047 315.849