Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1317 ATGCTTGTTTTTCTCATTGCAAGATTATCTTCGATACGGCCCTGCGGGAGGAGGATCCTTTTTGGTTCCCTCCATCACAATGCGTCCCACATTTTCAATTCGTTTTCTTCTGCTGCGAAATCATGTGTTACTTATCGACTGAAACAAAAGCAAAGGGATGGATCGATTACAATTTCTTATCTCATGAACTCTTGTGGTCTGTCGACCAAGTTAGCTATTGATATTTCCAAAAGGGTTAATTTGAAAAACACCCATGATCCCGATTCCGTACTTAATCTTTTCCGGAACTACGGATTCTCAGATATCCAGATATCCAAAATTGTGCAGAAGCATCCAAAAGTGCTTTTGATGAAGTCTGAGAAGAGCCTCTTGCCTAAGCTAAGGTTTTTCCAGTCTATAGGGTTTTCATGTTCTCAACTCCCTGAACTCCTCGTTTCTAAACCGCTGCTCCTACTTCCGAGCCTAAAGCAATGTATAATTCCCCGATATGAGTCCCTTAAAAGTGTACTTGATGACAATCAGAAAGTCATCAAAGCATTAAGATGCCCAGCCTGGGATTTTCTCAAACTTGATGCTAGAAATGTAGATCTAAACATAAAATTTTTGAGACAACTTGGAGTGCCTCAATCTTCTGTTTCTTCTCTGGTAACCAAGTTTCCAGGCGTAGCTTTTATGGAACATGCAAAGTTTGTTGAAAATGTCCAGTTTATTAGGAAAGCAGGAATTCCAACTTTTAAAGTTTTGTTCATCCGTGCACTTTATGTGTCATCACTGACGAAGAAATCAACCTGGGAGTTCAAGCTTGATATCTTTGAAAGGTGCGGCTGGTCTAGGGACGTCACTTTTTCAGCATTCATGAAGTTTCCCTTTTGCATGCTTCTGTCAGAAACAAAATCACTAGCACAATGA 909 0.4015 MLVFLIARLSSIRPCGRRILFGSLHHNASHIFNSFSSAAKSCVTYRLKQKQRDGSITISYLMNSCGLSTKLAIDISKRVNLKNTHDPDSVLNLFRNYGFSDIQISKIVQKHPKVLLMKSEKSLLPKLRFFQSIGFSCSQLPELLVSKPLLLLPSLKQCIIPRYESLKSVLDDNQKVIKALRCPAWDFLKLDARNVDLNIKFLRQLGVPQSSVSSLVTKFPGVAFMEHAKFVENVQFIRKAGIPTFKVLFIRALYVSSLTKKSTWEFKLDIFERCGWSRDVTFSAFMKFPFCMLLSETKSLAQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1317 302 Gene3D Transcription termination factor 3, mitochondrial 183 301 IPR038538 -
Prci8g1317 302 Gene3D Transcription termination factor 3, mitochondrial 62 182 IPR038538 -
Prci8g1317 302 PANTHER CGI-12 PROTEIN-RELATED 57 298 IPR003690 GO:0003690|GO:0006355
Prci8g1317 302 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Prci8g1317 302 SMART mt_12 141 173 IPR003690 GO:0003690|GO:0006355
Prci8g1317 302 SMART mt_12 213 243 IPR003690 GO:0003690|GO:0006355
Prci8g1317 302 Pfam mTERF 91 298 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1317 Prci-Chr8 9188881 9190509 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci8g1317 mTERF 2.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1317 K15031 - gmx:100788793 225.328