Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1312 ATGGAGGAGGAAAGTAACAACAACAAGAGTATTATTGATAAGGCAACAACAATGAATGAAAACAAGAGTTCATCATCACCAGAAGATGACGACGGCGAGGGAGGGATGCTTCCAGGTTTCAGATTCCATCCAACAGACGAAGAACTGGTAGGGTTTTATCTCAGAAGGAAAGTGGAGAAGAAGACTCTTCGAATCCAAGTCATCAAACACATTGATATCTACAAATACGATCCCTGGGATCTTCCAAAAGAAGCGAGCGGGAGCCTGGGAGAGAAGGAATGGTATTTCTTCTGCAAGAGGGGAAGGAAGTACAGGAACAGCATCAGGCCAAACAGGGTTACGGGGTCAGGATTCTGGAAGGCCACTGGAATTGACAAATCCATTTACAATAATGCCCTCACCCACTGCATTGGCCTCAAGAAGTCCCTCGTCTACTACAGGGGCAGTGCTGGCAAAGGCACCAAGACTGATTGGATGATGCACGAGTTTCGTCTCCCTCCTACTACTAACCCTTCCACCACCACCACCACCAATCAAAACAATCGTCTTCAAGAAGCTGAAGTGTGGACACTTTGTAGAATATTCAAACGAATCCCATCGTACAGAAAATACACACCAACTTCCAAAGATACAGCCACAGCAGGATCCGCCACTAGAAAAAATTATCACCACTCAACAGATACAGATTCAAGCAATTCTAAAACATTAGAATTTGACAAATACAACATCACCAAGCCATATAGCTCCACTTGTTTCAGGTCACCATCATCATCATCAGACTCTATCATTATTCCTCATCATCATCGTGAAACAAAATTACCATCATCAGTTCTTGATGAAGAAAGAAGCCACTTTTTTCTGGGTCAGTTTGCTGGCCATCATCATCATCATCAAGCTCCATCATCATCAATGGTGAATAATAGTTATAATTATAATCACAGCTTTTTGAATCATCAGAATGTGGAAGATGTGCTTGCCAATGGTAACTGGGATGAACTCAGATCTGTTGTTCAGTTTGCTGCTGATCATAATCATTCCACTGTTTTATGA 1050 0.4238 MEEESNNNKSIIDKATTMNENKSSSSPEDDDGEGGMLPGFRFHPTDEELVGFYLRRKVEKKTLRIQVIKHIDIYKYDPWDLPKEASGSLGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKSIYNNALTHCIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPTTNPSTTTTTNQNNRLQEAEVWTLCRIFKRIPSYRKYTPTSKDTATAGSATRKNYHHSTDTDSSNSKTLEFDKYNITKPYSSTCFRSPSSSSDSIIIPHHHRETKLPSSVLDEERSHFFLGQFAGHHHHHQAPSSSMVNNSYNYNHSFLNHQNVEDVLANGNWDELRSVVQFAADHNHSTVL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1312 349 MobiDBLite consensus disorder prediction 1 42 - -
Prci8g1312 349 MobiDBLite consensus disorder prediction 205 234 - -
Prci8g1312 349 ProSiteProfiles NAC domain profile. 36 197 IPR003441 GO:0003677|GO:0006355
Prci8g1312 349 Pfam No apical meristem (NAM) protein 38 165 IPR003441 GO:0003677|GO:0006355
Prci8g1312 349 SUPERFAMILY NAC domain 35 196 IPR036093 GO:0003677|GO:0006355
Prci8g1312 349 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 35 295 - -
Prci8g1312 349 MobiDBLite consensus disorder prediction 205 221 - -
Prci8g1312 349 FunFam NAC domain-containing protein 35 45 200 - -
Prci8g1312 349 Gene3D NAC domain 45 201 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1312 Prci-Chr8 9124900 9132696 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1312 17 197 NAC Transcription Factor Family AT5G39820 57.513 3.21e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci8g1312 NAM 7.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1312 - - pcin:129317195 651.744