Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1311 ATGGAGGAGGAAAGTAACAACAACAAGAGTATTATTGATAAGGCAACAACAATGAATGAAAACAAGAGTTCATCATCACCAGAAGATGACGACGGCGAGGGAGGGATGCTTCCAGGTTTCAGATTCCATCCAACAGACGAAGAACTGGTAGGGTTTTATCTCAGAAGGAAAGTGGAGAAGAAGACTCTTCGAATCCAAGTCATCAAACACATTGATATCTACAAATACGATCCCTGGGATCTTCCAAAAGCGAGCGGGAGCCTGGGAGAGAAGGAATGGTATTTCTTCTGCAAGAGGGGAAGGAAGTACAGGAACAGCATCAGGCCAAACAGGGTTACGGGGTCAGGATTCTGGAAGGCCACTGGAATTGACAAATCCATTTACAATAATGCCCTCACCCACTGCATTGGCCTCAAGAAGTCCCTCGTCTACTACAGGGGCAGTGCTGGCAAAGGCACCAAGACTGATTGGATGATGCACGAGTTTCGTCTCCCTCCTACTACTAACCCTTCCACCACCACCACCACCAATCAAAACAATCGTCTTCAAGAAGCTGAAGTGTGGACACTTTGTAGAATATTCAAACGAATCCCATCGTACAGAAAATACACACCAACTTCCAAAGATACAGCCACAGCAGGATCCGCCACTAGAAAAAATTATCACCACTCAACAGATACAGATTCAAGCAATTCTAAAACATTAGAATTTGACAAATACAACATCACCAAGCCATATAGCTCCACTTGTTTCAGGTCACCATCATCATCATCAGACTCTATCATTATTCCTCATCATCATCGTGAAACAAAATTACCATCATCAGTTCTTGATGAAGAAAGAAGCCACTTTTTTCTGGGTCAGTTTGCTGGCCATCATCATCATCATCAAGCTCCATCATCATCAATGGTGAATAATAGTTATAATTATAATCACAGCTTTTTGAATCATCAGAATGTGGAAGATGTGCTTGCCAATGGTAACTGGGATGAACTCAGATCTGTTGTTCAGTTTGCTGCTGATCATAATCATTCCACTGTTTTATGA 1047 0.4241 MEEESNNNKSIIDKATTMNENKSSSSPEDDDGEGGMLPGFRFHPTDEELVGFYLRRKVEKKTLRIQVIKHIDIYKYDPWDLPKASGSLGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKSIYNNALTHCIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPTTNPSTTTTTNQNNRLQEAEVWTLCRIFKRIPSYRKYTPTSKDTATAGSATRKNYHHSTDTDSSNSKTLEFDKYNITKPYSSTCFRSPSSSSDSIIIPHHHRETKLPSSVLDEERSHFFLGQFAGHHHHHQAPSSSMVNNSYNYNHSFLNHQNVEDVLANGNWDELRSVVQFAADHNHSTVL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1311 348 MobiDBLite consensus disorder prediction 1 42 - -
Prci8g1311 348 MobiDBLite consensus disorder prediction 204 220 - -
Prci8g1311 348 Gene3D NAC domain 45 200 IPR036093 GO:0003677|GO:0006355
Prci8g1311 348 Pfam No apical meristem (NAM) protein 38 164 IPR003441 GO:0003677|GO:0006355
Prci8g1311 348 ProSiteProfiles NAC domain profile. 36 196 IPR003441 GO:0003677|GO:0006355
Prci8g1311 348 SUPERFAMILY NAC domain 35 195 IPR036093 GO:0003677|GO:0006355
Prci8g1311 348 FunFam NAC domain-containing protein 35 45 199 - -
Prci8g1311 348 MobiDBLite consensus disorder prediction 204 233 - -
Prci8g1311 348 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 35 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1311 Prci-Chr8 9124900 9132696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1311 17 196 NAC Transcription Factor Family AT5G39820 57.292 4.39e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci8g1311 NAM 8.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1311 - - pcin:129317195 645.195