Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1291 ATGGCGAGTGAGAAGGATAATTATTATGATCAGTATGATCTTAATAATCTGTACTACAACCACCATCAGAACCTTGTTCAAGGGTTTGATCATCATCATCCATCTTCACACGGCACGAGCTTCACTGATTGCTTGAATGGTGGGTTCATGGACTATAATGCCCTCTCTAGAGCCTTCGACTTGTCTTGCTCATCTGCATCTGAAGTGATCTCGTCCTCCATTAACGATGATCAGCTCAATCCAAAGAAGCCATCATCTGCAGCCACTAGTCCTATGGCCACTGATGCGGGAGACTCTCAAGTGGGTCCCAATAATTCCTCTGTGTCCAATTCATCTTCCAATAATGAAGAGGCAGAAGAAGCAGTGGTCACAGAAGAAGACTCAGCCAAAAGCTTTAAGCAAGACAAAGGCCAAGATGGCGACCAAATGTCTAAGAAAGAGAACAAGGCAAAAGGGAATAAGAAAGAGAAAAAGCCAAGAGAGCCGCGCTTTGCCTTCTTGACTAAAAGTGAGGTTGATCACTTAGAAGATGGATACAGGTGGAGAAAATATGGACAGAAAGCCGTCAAGAACAGTCCTTACCCAAGGAGTTATTACAGATGCACAAGTCAAAAGTGCAATGTGAAGAAGAGGGTGGAGAGGTCATTCCAGGATCCATCAATTGTGGTCACAACATACGAAGGGCAGCACAACCACCACTGTCCGGCGACACTTCGTGGCAGCGCCAACGCCGCCATGATGTTATCATCGGCGGTGGCAACACCTTCCCTTTTCGGTTCTTCGCTGGTGGGGAGGACAACCATGTTTCCCCAGGAACTCCTTGCTCAGTTTCTTCCAAGCTATAGCCAAGGTGATAATAATGATCATCACCATCACCAAAGCCATCCCATGTTCCACCAAAACCCTAATAATACTCATCATCATCATCACCAGCAACAGCAACACCAAGTTCCACATGACTATGGCTTGTTGCAGGACCTGTTACCTCCTTCTTCATCATCCGTCCCTGGTAGACAACAAGAGCCATGA 1029 0.4626 MASEKDNYYDQYDLNNLYYNHHQNLVQGFDHHHPSSHGTSFTDCLNGGFMDYNALSRAFDLSCSSASEVISSSINDDQLNPKKPSSAATSPMATDAGDSQVGPNNSSVSNSSSNNEEAEEAVVTEEDSAKSFKQDKGQDGDQMSKKENKAKGNKKEKKPREPRFAFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCNVKKRVERSFQDPSIVVTTYEGQHNHHCPATLRGSANAAMMLSSAVATPSLFGSSLVGRTTMFPQELLAQFLPSYSQGDNNDHHHHQSHPMFHQNPNNTHHHHHQQQQHQVPHDYGLLQDLLPPSSSSVPGRQQEP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1291 342 MobiDBLite consensus disorder prediction 323 342 - -
Prci8g1291 342 FunFam WRKY transcription factor 57 161 235 - -
Prci8g1291 342 Pfam WRKY DNA -binding domain 176 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1291 342 MobiDBLite consensus disorder prediction 74 118 - -
Prci8g1291 342 ProSiteProfiles WRKY domain profile. 170 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1291 342 MobiDBLite consensus disorder prediction 74 164 - -
Prci8g1291 342 MobiDBLite consensus disorder prediction 280 318 - -
Prci8g1291 342 MobiDBLite consensus disorder prediction 124 164 - -
Prci8g1291 342 Gene3D WRKY domain 143 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g1291 342 Coils Coil 115 135 - -
Prci8g1291 342 MobiDBLite consensus disorder prediction 327 342 - -
Prci8g1291 342 SMART WRKY_cls 175 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g1291 342 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 68 303 IPR044810 GO:0003700
Prci8g1291 342 SUPERFAMILY WRKY DNA-binding domain 168 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1291 Prci-Chr8 8970800 8973388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1291 33 329 WRKY Transcription Factor Family AT4G18170 45.033 2.46e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci8g1291 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1291 - - gmx:100806016 298.516