Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1288 ATGGATGAACCCCTTCTCTCCAAGAAACGAGGACTGGTGGCAGAATCATCAAGCAGGCCATCGTCCCTAAGAGAACTTAACTCAGCCTATATTGATCTTATCACCAATGAAGAGGTCATTCAGATAATTACCACACCCAGGACGAGCCCTTCTTATTTGAACCTCATAGCCAACTTGAACAGAAGAAAGAAGATCATCCATCGCTCACACTCTGCTCCATCAGTTTTCACTAGTGTCAGAAAAGATGGCCATGATTCCTTTGACCTCAGAATCTCACAAAAAACATCACCTACTATAGTAACGCTATCCTTTATTGGTGTCATCTTGTATGTGGCAATTGGGGTTTTAGTTTACTTAGTAAGTGGGAGTTTCAAGGGCAAATCCACCTACAAGCCTGTGGATGCTGTGTACTTCACAGTGGTAACTCTCTGCACAATAGGGTATGGTGATATTGTCCCTGACACAGCATTCACCAAAATCTTTACCTGTGGGTTCATTCTGGTGGGTTTCGGATTTGTCGGCATTCTGCTAAATGGCTTAGTCACCTACATTTGTGATAGACAAGAAGAAATGTTGCTGAGTGCCATGGATGAGAATCGATTCAATACACTCATCAAATCATATATGATAGACAAAGAGAAAGGAAGAATGAGAATAAGAACCAAAGTGTGTCTAGCTATGGCAGTGGTTGTTTGCTGTGTTGCTATAGGAACAATTTGTGCTCGCTACCTTGAGAACTTGGATTGGCTGGACTGTTTTTATCTCTCTGTTACTTCTGTTACAACAGTGGGCTATGGGGATTATGCTTTTGCCACTGAGAGTGGAAGGTGTTTTGCATCAGTATGGCTCTTGGTGAGCACATTGGCAGTTGGCAGGGCCTTCCTTTACCTAACTGAATACAGCATTGACAAGAGAAATCGTACTATTGCAAAATGGATTCTTCACAAGAAGATTACCTTGTCAGATTTAGTGGCCGCTGACCTAGACAATGATGGATCCATCAGGAATAAGTTGATCTGA 1020 0.4235 MDEPLLSKKRGLVAESSSRPSSLRELNSAYIDLITNEEVIQIITTPRTSPSYLNLIANLNRRKKIIHRSHSAPSVFTSVRKDGHDSFDLRISQKTSPTIVTLSFIGVILYVAIGVLVYLVSGSFKGKSTYKPVDAVYFTVVTLCTIGYGDIVPDTAFTKIFTCGFILVGFGFVGILLNGLVTYICDRQEEMLLSAMDENRFNTLIKSYMIDKEKGRMRIRTKVCLAMAVVVCCVAIGTICARYLENLDWLDCFYLSVTSVTTVGYGDYAFATESGRCFASVWLLVSTLAVGRAFLYLTEYSIDKRNRTIAKWILHKKITLSDLVAADLDNDGSIRNKLI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1288 339 FunFam Two-pore potassium channel 2-like 201 325 - -
Prci8g1288 339 PRINTS Two pore domain K+ channel signature 141 169 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci8g1288 339 PRINTS Two pore domain K+ channel signature 261 270 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci8g1288 339 Gene3D - 87 209 - -
Prci8g1288 339 Gene3D - 210 319 - -
Prci8g1288 339 SUPERFAMILY Voltage-gated potassium channels 212 317 - -
Prci8g1288 339 Pfam Ion channel 230 298 IPR013099 -
Prci8g1288 339 Pfam Ion channel 107 184 IPR013099 -
Prci8g1288 339 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 132 321 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci8g1288 339 SUPERFAMILY Voltage-gated potassium channels 90 184 - -
Prci8g1288 339 FunFam Two-pore potassium channel 2-like 98 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1288 Prci-Chr8 8929720 8931413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1288 66 334 Ion Channels AT4G18160 48.519 8.49e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1288 K05389 - qsa:O6P43_014787 443.736