Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1286 ATGGATGAACCCCTTCTCTCCAAGAAACGAGGACTGGTGGCAGAATCATCAAGCAGGCCATCGTCCCTAAGAGAACTTAACTCAGCCTATATTGATCTTATCACCAATGAAGAGGTCATTCAGATAATTACCACACCCAGGACGAGCCCTTCTTATTTGAACCTCATAGCCAACTTGAACAGAAGAAAGAAGATCATCCATCGCTCACACTCTGCTCCATCAGTTTTCACTAGTGTCAGAAAAGATGGCCATGATTCCTTTGACCTCAGAATCTCACAAAAAACATCACCTACTATAGTAACGCTATCCTTTATTGGTGTCATCTTGTATGTGGCAATTGGGGTTTTAGTTTACTTAGTAAGTGGGAGTTTCAAGGGCAAATCCACCTACAAGCCTGTGGATGCTGTGTACTTCACAGTGGTAACTCTCTGCACAATAGGGTATGGTGATATTGTCCCTGACACAGCATTCACCAAAATCTTTACCTGTGGGTTCATTCTGGTGGGTTTCGGATTTGTCGGCATTCTGCTAAATGGCTTAGTCACCTACATTTGTGATAGACAAGAAGAAATGTTGCTGAGTGCCATGGATGAGAATCGATTCAATACACTCATCAAATCATATATGATAGACAAAGAGAAAGGAAGAATGAGAATAAGAACCAAAGTGTGTCTAGCTATGGCAGTGGTTGTTTGCTGTGTTGCTATAGGAACAATTTGTGCTCGCTACCTTGAGAACTTGGATTGGCTGGACTGTTTTTATCTCTCTGTTACTTCTGTTACAACAGTGGGCTATGGGGATTATGCTTTTGCCACTGAGAGTGGAAGGTGTTTTGCATCAGTATGGCTCTTGGTGAGCACATTGGCAGTTGGCAGGGCCTTCCTTTACCTAACTGAATACAGCATTGACAAGAGAAATCGTACTATTGCAAAATGGATTCTTCACAAGAAGATTACCTTGTCAGATTTAGTGGCCGCTGACCTAGACAATGATGGATCCATCAGCAAGTCTGAATTTGTCATATATAAGCTTAAGGAGATGGGGAAGATAGCTGAGAAAGACATTCAACAAATAAGCAAACTCTTTGACTCATTGGACAGTAGCCAATGTGGCAAGATTACTCTTGCTGACCTGATGGAAACTGCGTGA 1149 0.4221 MDEPLLSKKRGLVAESSSRPSSLRELNSAYIDLITNEEVIQIITTPRTSPSYLNLIANLNRRKKIIHRSHSAPSVFTSVRKDGHDSFDLRISQKTSPTIVTLSFIGVILYVAIGVLVYLVSGSFKGKSTYKPVDAVYFTVVTLCTIGYGDIVPDTAFTKIFTCGFILVGFGFVGILLNGLVTYICDRQEEMLLSAMDENRFNTLIKSYMIDKEKGRMRIRTKVCLAMAVVVCCVAIGTICARYLENLDWLDCFYLSVTSVTTVGYGDYAFATESGRCFASVWLLVSTLAVGRAFLYLTEYSIDKRNRTIAKWILHKKITLSDLVAADLDNDGSISKSEFVIYKLKEMGKIAEKDIQQISKLFDSLDSSQCGKITLADLMETA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1286 382 Pfam Ion channel 230 298 IPR013099 -
Prci8g1286 382 Pfam Ion channel 107 184 IPR013099 -
Prci8g1286 382 ProSitePatterns EF-hand calcium-binding domain. 327 339 IPR018247 -
Prci8g1286 382 FunFam Two-pore potassium channel 2-like 98 194 - -
Prci8g1286 382 Gene3D - 87 209 - -
Prci8g1286 382 ProSiteProfiles EF-hand calcium-binding domain profile. 353 382 IPR002048 GO:0005509
Prci8g1286 382 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 133 357 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci8g1286 382 PRINTS Two pore domain K+ channel signature 141 169 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci8g1286 382 PRINTS Two pore domain K+ channel signature 261 270 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci8g1286 382 Gene3D - 323 382 - -
Prci8g1286 382 FunFam Two-pore potassium channel 2-like 201 325 - -
Prci8g1286 382 SUPERFAMILY Voltage-gated potassium channels 90 184 - -
Prci8g1286 382 SUPERFAMILY EF-hand 324 379 IPR011992 -
Prci8g1286 382 SUPERFAMILY Voltage-gated potassium channels 212 318 - -
Prci8g1286 382 Gene3D - 210 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1286 Prci-Chr8 8929720 8932403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1286 66 380 Ion Channels AT4G18160 51.266 6.48e-107 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1286 K05389 - qsa:O6P43_014787 516.153