Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1272 ATGGAACAAAACATTCAAAAGCAAATAAACCAAGGATGGCTAGAGCCAGAGGGAGAAGATGACTATGCTTGTATGTACGCGCACACGATCTCTGGAGGCAATCCTTCGGTTTTCAACCTTGCAGAATTGTCGCCAACTAAGGAAGCTGTTTCCCCAGTTTCTTTCGCAGCTGATCAGGAAGAAACTGTCGGCCGGCGACCTCGTGGTAGGCCGGCCGGCTCCAAGAACAAGCCGAAACCACCCATTATCGTCACTAGGGACAGTGCTAATGCACTTAAGGCTCATGCACTGGAAGTCACATCTGGGTGTGATATCAATGAAAGTTTGCTCAGCTTTGCAAGAAGGAAGCAGAGGGGGATTTGCATTCTCAGTGGAACTGGCTGTGTCACTAATGTAACTCTACGCCAGCTTGCTTCTTCTGGGGCAACAGTGACACTCCATGGTCGGTTTGAGATTCTCTCCTTGCTTGGGTCGATCCTGCCGCCGCCTGCGCCACCGGGGATCACCGGGCTGACGATCTACCTTGCCGGAGCTCAAGGGCAGGTTGTGGGTGGTGCTGTGGTGGGGGCTCTGGTTGCTTCAGGACCAGTGGTGATCATGGCTGCTTCGTTCATGAATGCTACTTTTGATCGTCTGCCATTAATGGAGGACGACGAGATTGCCCAGAATCAGCAGCATTACCAGAATGGTCGAAGCCACCACCACCACCACCACCATCTTGATGCCTCAGATTTGTATGGAATACCTCAGAACTTGCTCACCAATGGTGCAATCCCTCCTGAGATATATTCATGGGCTCCTGGGCGTAATAACTTCTCAAAAGCCTGA 828 0.5145 MEQNIQKQINQGWLEPEGEDDYACMYAHTISGGNPSVFNLAELSPTKEAVSPVSFAADQEETVGRRPRGRPAGSKNKPKPPIIVTRDSANALKAHALEVTSGCDINESLLSFARRKQRGICILSGTGCVTNVTLRQLASSGATVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALVASGPVVIMAASFMNATFDRLPLMEDDEIAQNQQHYQNGRSHHHHHHHLDASDLYGIPQNLLTNGAIPPEIYSWAPGRNNFSKA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1272 275 Gene3D - 91 240 - -
Prci8g1272 275 MobiDBLite consensus disorder prediction 51 82 - -
Prci8g1272 275 FunFam AT-hook motif nuclear-localized protein 92 219 - -
Prci8g1272 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 214 - -
Prci8g1272 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 205 IPR005175 -
Prci8g1272 275 ProSiteProfiles PPC domain profile profile. 89 228 IPR005175 -
Prci8g1272 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 58 233 IPR014476 GO:0003680
Prci8g1272 275 CDD DUF296 95 175 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1272 Prci-Chr8 8774192 8776179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1272 48 274 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 71.179 1.68e-98 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1272 - - pcin:129317250 498.819