Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1249 ATGTTCTCAAGTTCGCCGTCTTCTTCGACTTTTGCCTCTAAACCCTCGAACTTCCTTTTCGAACCATCATTGCTCATGGCTGTGGCGATTCCAGCAGCTGCACCTTCCACAGCTGTCGATAGGGTTAGCCCCAATACAGTGCAACAAGCTGTGGATGCTATCGTGAAATGGAGGAATTCTAAGTCCGAGGTCGAGAAACCCAAGCTATTTGACCTAGACGATGAATTCGTCTACCTCGTCCTCACCCTGAATAAACTTCCTCCGAAGTCTCGCGTCAATGCCCACAAGATCCCACTTCCGCATTCCCTCCTCTCCGAATTCTCTGAGCACTGTTTGATCATTGATGATAGACCCAAGTCGAATCTCACCAAAGAGGACGCGCAGAAGAAGATCAAATCGGAGAATATTCCAGTTTCCAAAGTTCTTAAGCTTTCGAAGCTTCAGTCTAATTATCGTCCCTTCGAGGCTAAGCGGAAGCTCTGTGGCTCTTACCACATGTTTTTCGCAGATAAAGGGGTGATTCCTCTGCTGCCACGGCTATTGGGTAAGCATTTCTTTAAGAAGAAGAAGATCCCTGTGCCGGTGGATTTGAAGCATAAAAATTGGAAGGAGCAGATTGAGAGGGCATGCTCGTCGGGGTTGTTGTTCCTCAGGACAGGTACGTGTAGTGTGATGAGAGTTGCCAAAATGTCAATGGAAAGGGACGAGATCGTTGCCAATGTGACTGCTGCAATCAATGGGATCGTGGAGCTCATGCCCAAAGGGTGGGGGACCATACGGTCGTTTCATTTGAAACTGACGGGTTCGGTTGCATTGCCGCTTTATCAGGCAATCCCTGATATGAAATTGAAGATCGAAGGAGCTGAGACCAAAGAGGAAGCCAAGGAAGAGGATGGAGATATTGTGAAAAAAGAGCCTAAGAAGGATCTTAAAGTTGGTAAGAAGAAGGGGAGGATTCATGAAGTTCGGTACATGGATGATAATATAGGTCATGAACTTAGTCAAGATGAGTCAGGTGGTGAGGACGATGGGGGTGTTAAAGAAGAAGATGAGAATGATGAAATGAATATTGAACCGCTAGTGCATAAGAAGAAAAGGAAAGGATCAAAAACTGACAAAGGGGTTCACAGTGAGCTGCATAGTGAGAAAAAATTGAAGAAGTCAGCCAAGGACAAGGGTGAAAGTAAGAAAGACGGGTTGTCTTCTAAGAGAAAGAAGGAAAATGATTTACCTGCTAAGGATGAAGTTTCTGGCAAGAAGAAGAAGAAGGGAAGTGGAGAAGTGAAAGTAAAAGCTAAGAAAATTAAGAAGGCTGCTTAA 1320 0.4515 MFSSSPSSSTFASKPSNFLFEPSLLMAVAIPAAAPSTAVDRVSPNTVQQAVDAIVKWRNSKSEVEKPKLFDLDDEFVYLVLTLNKLPPKSRVNAHKIPLPHSLLSEFSEHCLIIDDRPKSNLTKEDAQKKIKSENIPVSKVLKLSKLQSNYRPFEAKRKLCGSYHMFFADKGVIPLLPRLLGKHFFKKKKIPVPVDLKHKNWKEQIERACSSGLLFLRTGTCSVMRVAKMSMERDEIVANVTAAINGIVELMPKGWGTIRSFHLKLTGSVALPLYQAIPDMKLKIEGAETKEEAKEEDGDIVKKEPKKDLKVGKKKGRIHEVRYMDDNIGHELSQDESGGEDDGGVKEEDENDEMNIEPLVHKKKRKGSKTDKGVHSELHSEKKLKKSAKDKGESKKDGLSSKRKKENDLPAKDEVSGKKKKKGSGEVKVKAKKIKKAA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1249 439 MobiDBLite consensus disorder prediction 371 423 - -
Prci8g1249 439 SUPERFAMILY Ribosomal protein L1 41 275 IPR023674 -
Prci8g1249 439 FunFam Ribosomal protein L1p/L10e family 120 211 - -
Prci8g1249 439 MobiDBLite consensus disorder prediction 315 341 - -
Prci8g1249 439 MobiDBLite consensus disorder prediction 291 308 - -
Prci8g1249 439 CDD Ribosomal_L1 47 274 IPR028364 -
Prci8g1249 439 MobiDBLite consensus disorder prediction 424 439 - -
Prci8g1249 439 Gene3D - 120 212 IPR016095 -
Prci8g1249 439 Pfam Ribosomal protein L1p/L10e family 73 270 IPR028364 -
Prci8g1249 439 MobiDBLite consensus disorder prediction 291 439 - -
Prci8g1249 439 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 50 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1249 Prci-Chr8 8499651 8501191 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1249 163 267 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.429 6.91e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1249 K14775 - qsa:O6P43_014803 460.685