Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1227 ATGGAAGTCGCCAACAAGTCCCAAAGTCGCTTCACGCTGGGCAGGCAATCTTCTATGGCGCCGGAGCGCAGGAACTCCGGCGATGACACTGGGTCGGAGGCGATTCACTCGAGCGTGAGGTTGATGTACTTGGCGAACGAAGGGGATTTGGATGGAATCAAGGAGCTCTTGGACTCTGGAAGTGATGTCAATTTCAGAGACATTGATGGCCGCACCGCTTTGCACGTCGCCGCTTGTCAGGGTCTCACCGATGTCGTTGAAATGTTAATCCAAAGGGGTGCCGAGGTCGACCCAAAGGACCGGTGGGACAGCACGCCTCTAGCAGATGCAATGTACTACAAAAATCATGATGTTGCAAAACTTTTGGAAAAACATGGAGCAAAATCCCTGACGGCTCCAATGCTTGTCCAAAATGTTCGTGAAGTCCCAGAATATGAGATTAACCCTTCTGAACTCGATTTTACAAATAGTGTTAGTATAACAAAGGGGACTTTCCGTGTTGCATTATGGCGTGGCACTCATGTTGCTGTTAAAACTCTTGGGGAGGAAGTATTAACTGATGATGATAAACTGAAAGCATTTCGTGATGAGCTTGCATTATTTCAAAAATTACGGCATCCAAATATAGTCCAATTTTTAGGTGCTGTAACACAGAGCACCCCAATGATGATTGTTACAGAATATCTACCTCAGGGAGATCTTCATGCCTACTTGAGAAGGAGAGGTGCATTGAAACCAATGACAGCTGTGAAGTTTGCGCTTGACATTTCAAGGGGAATGAATTATTTGCATGAGCATAGACCAGAAGTGATTATACACCGAGATCTTGAGCCTTCAAATATATTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGGGTTAGCAAGTTGCTTAAAGTTGCAAAAACAGTCAAAGAAGACAAACCTGTGGCTAGCGAGGATACTTCATGGCGCTATGTTGCTCCGGAGGTCTATAAAAATGAGGAGTATGATACGAAAGTGGATGTTTTTTCGTTTGCTCTAATATTACATGAGATGATTGAGGGCTGTCCACCATTTCCTACAATGCCAGAAAAAGAAGTTCCTAAAGCATATGTGGGAAACGAGCGTCCACATTTTAAGGCTTCACCTATGGCGTATGCGCATGGACTAAAAGAGTTAATTGAGGAATGTTGGGATAAAGAACCTCACAGGAGACCCACGTTTGGACAAATAATTGAGAGATTGGAAAACATCAGCAACCATCTTGCACAGGAAAAGCGCTGGGAGGATTGTACCTGTAGTTGCTTCCAGAATCTGAGGACCTTGTTTCAGCGAAATCGGACAAATCCAGGTAGCCGATCATCTCGATCAAGAACCAGATGA 1371 0.4486 MEVANKSQSRFTLGRQSSMAPERRNSGDDTGSEAIHSSVRLMYLANEGDLDGIKELLDSGSDVNFRDIDGRTALHVAACQGLTDVVEMLIQRGAEVDPKDRWDSTPLADAMYYKNHDVAKLLEKHGAKSLTAPMLVQNVREVPEYEINPSELDFTNSVSITKGTFRVALWRGTHVAVKTLGEEVLTDDDKLKAFRDELALFQKLRHPNIVQFLGAVTQSTPMMIVTEYLPQGDLHAYLRRRGALKPMTAVKFALDISRGMNYLHEHRPEVIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVASEDTSWRYVAPEVYKNEEYDTKVDVFSFALILHEMIEGCPPFPTMPEKEVPKAYVGNERPHFKASPMAYAHGLKELIEECWDKEPHRRPTFGQIIERLENISNHLAQEKRWEDCTCSCFQNLRTLFQRNRTNPGSRSSRSRTR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1227 456 SUPERFAMILY Protein kinase-like (PK-like) 170 428 IPR011009 -
Prci8g1227 456 Pfam Ankyrin repeats (3 copies) 41 127 IPR002110 GO:0005515
Prci8g1227 456 Gene3D Transferase(Phosphotransferase) domain 1 230 450 - -
Prci8g1227 456 FunFam Os01g0748600 protein 140 431 - -
Prci8g1227 456 PIRSF ILK 1 434 - -
Prci8g1227 456 ProSiteProfiles Protein kinase domain profile. 119 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1227 456 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Prci8g1227 456 SMART ANK_2a 36 65 IPR002110 GO:0005515
Prci8g1227 456 SMART ANK_2a 102 132 IPR002110 GO:0005515
Prci8g1227 456 SMART ANK_2a 69 98 IPR002110 GO:0005515
Prci8g1227 456 Gene3D - 32 141 IPR036770 -
Prci8g1227 456 Gene3D Phosphorylase Kinase; domain 1 146 229 - -
Prci8g1227 456 FunFam serine/threonine-protein kinase STY46-like 147 230 - -
Prci8g1227 456 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Prci8g1227 456 ProSiteProfiles Ankyrin repeat profile. 36 68 IPR002110 GO:0005515
Prci8g1227 456 FunFam Integrin-linked protein kinase family 21 145 - -
Prci8g1227 456 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 108 419 - -
Prci8g1227 456 MobiDBLite consensus disorder prediction 1 32 - -
Prci8g1227 456 SUPERFAMILY Ankyrin repeat 40 128 IPR036770 -
Prci8g1227 456 CDD STKc_MAP3K-like 160 411 - -
Prci8g1227 456 Pfam Protein tyrosine and serine/threonine kinase 171 411 IPR001245 GO:0004672|GO:0006468
Prci8g1227 456 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1227 Prci-Chr8 8194466 8202461 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1227 8 434 MAP Kinase Kinase Kinase AT4G18950 64.977 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Prci8g1227 PK_Tyr_Ser-Thr 4.1e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1227 - - gmx:100795964 729.939