Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1212 ATGGATACCAAGCTTTTCGTTCTCTTTCTATTAACTGCCTCCACTTCCCAGCTCTTTCTCTCACAATTCGCTTTCGCGGACACAGGCATTCTCGACAGTGAAGAAGCTAAGACATTGAAAGAAATAGCGAGGAAAATAGGGAAGAATGATTGGTACCTTGAAAGAGAGGATCCTTGCAGTGGGAAAAGGCAGTTTAATGCGTCTGATGACAGCACCAACTTTGAGAGCATTGTGGTCTGTAAATGTAACAAGTCTTCTTGCCATGTCGTAAGCATATCCTTGAAGTCTCAGAATCTTTCTGGTACTATCCCGCCAGAGTTTTCCAAGCTAAATCATCTCGAGAAATTGACCCTGAATCTTAACATCCTCGATGGTTCTATACCTAACCAATGGGCCAGTATGCAATTGGTTGACCTCTCGATTATGGGGAACAGATTGTCAGGTCCATTCCCCACAGTTCTCACGAACATCACGACTCTCCAGAGCCTGACTATTGAAGGAAATCTATTTTCCGGTCCCATTCCACCGGATATTGGAAAGTTGGTCAAGTTAGAAAAACTACATCTGTCGTCAAATGCATTTACTGGAGAATTGCCAGTTGAACTTTCGAAGTTGAAGAATTTGACTGATTTGAGGATAAGTGACAATAACCTCTCTGGGAGGATTCCTGATTTTGTTAGTAACTGGACATTAATTAAAACGCTGCACATGGAGGGTTGTTCTCTCGAGGGGCCCATACCTTCAAGCATTTCAGCCTTGACAAGCTTAAGTGATTTGAGGATAACTGACCTAAAAGGTGGAGCCTCTGATTTCCCATCATTAAGCAAGATGAAATCCTTGAAGAAATTGATATTGAGGAACTGTATGATTAAAGGGGAGATCCCAGAAGATATTGGGAAAATGGAAAACCTGACAACCTTAGATTTGAGTTTCAATAACTTGACTGGAAAGATACCAGATACTTTTGCTCAACTTGGAAGTGTAAAATTTGTATATCTTACTGGGAACAAGCTAGGAGGGACAATTCCTGACTGGGTCCTTGAATCAAACAAACAAATTGATATTTCTAATAATAACTTTAGCTGGGGTAGCTCAAGTCCAGTTGAATGCCTGCAAGGGAGTGTAAACATAATGGAATGCTACTCATCATCTGTGGACACAGAAAGTAGGGTTAATCCATGCCTGAAAAGGAACTTTCCTTGTCCTGCTTCAACCAAGCAATATCGTTATTCATTGCATGTTAATTGTGGTGGTGAGGAAGCAAATATCAATGATATATTATATGAAGCTGACGTAGAAAAAAGAGGTGCTGCCGTGTTTTACTCCACCCAGAACTGGGCACTTAGCAGCACAGGGGACTTCATGGACAATCATGAGAACTCTGATAATTATATTCTGACCAATACTTCTACACTTCTCAATGTCTCTGTCATCGATTCACAACTGTACACAACAGCTCGCATGTCTCCTCTTTCTCTCACATATTATGGACTCTGTCTCTTAAATGGAAACTACACTGTGAAGCTTCACTTTGCAGAGATTTTGTTCTTGAATGATAGATCATATTACAGTCTTGGCAGGCGGATATTTGATGTCTACATCCAGGGGAATTTGGTCCTGAAAGACTTCAATATAGAGAGTGTAGCTGGTGGTGCTGGTGAGCCTGTTGTGAAGACATTCAACGCTACAGTCACCCAACATACCTTGAAAATTCACTTGTACTGGGCTGGAAAGGGCACAACAGGCATACCAAAGAGAGGATATTATGGACCTCTAGTGTCTGCTATATCAGTGGATCCTAATTTTAAACCTCCTAAACCTTCATCCGGGGATGGAAAGAGAATTTATATCATGGTGGTTGGAACAATAGCTGTTGTTATAGTTCTTGTTCTTTTGGTCTTGGGCATCATGAGGAGGAAGGGCTGGCTAGGAGGCAATAACTCTGTGCACAAAGATCTTAGAGGTTTAGATCTTCAGATGAGATTATTTACATTAAGACAAATCAAAGCAGCAACTGAAAACTTCAATGCAGCCAACAAAATTGGGGAAGGGTTTGGCTCTGTTTACAAGGGTCTGCTGTCAGATGGCACAGTAATTGCAGTAAAACATCTCTCCTCAAAATCTACACAAGGAATCCGTGAATTTGTGAATAAGTTAGGAATGATATCTGGCCTTCAACATCCCAATCTTGTTAAGCTTTATGGATGTTGTGTGGAAGGAGACCAGTTAATGCTGATATATGAGTATATGGAAAACAATTGTCTATCTCGTGTTCTTTTTGGGAAGGATCCTGCCTGCCATGTGATATTGGACTGGCCAACCAGGAGGAAAATTTGCCTTGGTATAGCTAGAGCTTTGGCTTTTCTCCACGAAGAGTGTGTGATTAAAATCATACACAGGGATATAAAAACAAGTAATGTGTTGCTTGACAAGGATTTGAATGCTAAGATTTCAGACTTTGGTTTTGCAAAACTCAATGTAGATGAAAATAGCCACGTTAGCACTCGCGTTGCAGGAACCATTGGTTATATGGCTCTTGAGTATGCAATGCGTGGTTATTTAACTGATAAAGCTGACATTTATAGTTTTGGGGTGGTTGCATTGGAAATTGTCAGTGGAAAAAGTAATACAAATTTCATACCCAGTGAAGAATTCGTTTTCCTCCTTGATTGGGCCAATGTTTTGCAAGAGAAAGGAAGGCTGCAAGAGCTGGTCGATCCAGATTTGGGTTCAGAATACTCAACTGAGGAGGCCATGGTGATGCTAAATGTGGCACTCCTATGTACCAATGCATCTCCTACACTTAGGCCAACAATGTCCCAAGTTCTGAGCATGCTTGAAGGCAGAAGTAACATGCAGGATCTACTTTCTGATCCAGGACATCAAGCAGCTAATTTCAATTATGAGGCCTTAAGAAGTCATTTCTGCGACAATTCAAGCCTCCGAGAAAGCATGTCAATTCATGGTCTATGTCCAGTTTCCTCTTGTTCAGGCGCTGAAGCAGAAGAGAGTCACCTTCTTGTAAATGTTAGCTCAGACACTATTGACTAG 3051 0.412 MDTKLFVLFLLTASTSQLFLSQFAFADTGILDSEEAKTLKEIARKIGKNDWYLEREDPCSGKRQFNASDDSTNFESIVVCKCNKSSCHVVSISLKSQNLSGTIPPEFSKLNHLEKLTLNLNILDGSIPNQWASMQLVDLSIMGNRLSGPFPTVLTNITTLQSLTIEGNLFSGPIPPDIGKLVKLEKLHLSSNAFTGELPVELSKLKNLTDLRISDNNLSGRIPDFVSNWTLIKTLHMEGCSLEGPIPSSISALTSLSDLRITDLKGGASDFPSLSKMKSLKKLILRNCMIKGEIPEDIGKMENLTTLDLSFNNLTGKIPDTFAQLGSVKFVYLTGNKLGGTIPDWVLESNKQIDISNNNFSWGSSSPVECLQGSVNIMECYSSSVDTESRVNPCLKRNFPCPASTKQYRYSLHVNCGGEEANINDILYEADVEKRGAAVFYSTQNWALSSTGDFMDNHENSDNYILTNTSTLLNVSVIDSQLYTTARMSPLSLTYYGLCLLNGNYTVKLHFAEILFLNDRSYYSLGRRIFDVYIQGNLVLKDFNIESVAGGAGEPVVKTFNATVTQHTLKIHLYWAGKGTTGIPKRGYYGPLVSAISVDPNFKPPKPSSGDGKRIYIMVVGTIAVVIVLVLLVLGIMRRKGWLGGNNSVHKDLRGLDLQMRLFTLRQIKAATENFNAANKIGEGXFGSVYKGLLSDGTVIAVKHLSSKSTQGIREFVNKLGMISGLQHPNLVKLYGCCVEGDQLMLIYEYMENNCLSRVLFGKDPACHVILDWPTRRKICLGIARALAFLHEECVIKIIHRDIKTSNVLLDKDLNAKISDFGFAKLNVDENSHVSTRVAGTIGYMALEYAMRGYLTDKADIYSFGVVALEIVSGKSNTNFIPSEEFVFLLDWANVLQEKGRLQELVDPDLGSEYSTEEAMVMLNVALLCTNASPTLRPTMSQVLSMLEGRSNMQDLLSDPGHQAANFNYEALRSHFCDNSSLRESMSIHGLCPVSSCSGAEAEESHLLVNVSSDTID 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1212 1017 SMART serkin_6 675 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1212 1017 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 980 - -
Prci8g1212 1017 CDD STKc_IRAK 681 949 - -
Prci8g1212 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Prci8g1212 1017 Gene3D - 407 600 - -
Prci8g1212 1017 Pfam Leucine rich repeat 279 338 IPR001611 GO:0005515
Prci8g1212 1017 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 37 198 - -
Prci8g1212 1017 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 409 601 - -
Prci8g1212 1017 Gene3D Transferase(Phosphotransferase) domain 1 751 965 - -
Prci8g1212 1017 Gene3D Ribonuclease Inhibitor 230 372 IPR032675 -
Prci8g1212 1017 FunFam Putative LRR receptor-like serine/threonine-protein kinase 751 959 - -
Prci8g1212 1017 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 271 363 - -
Prci8g1212 1017 Pfam Malectin domain 411 596 IPR021720 -
Prci8g1212 1017 Gene3D Phosphorylase Kinase; domain 1 646 750 - -
Prci8g1212 1017 ProSitePatterns Protein kinases ATP-binding region signature. 681 703 IPR017441 GO:0005524
Prci8g1212 1017 ProSiteProfiles Protein kinase domain profile. 675 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1212 1017 SUPERFAMILY L domain-like 79 361 - -
Prci8g1212 1017 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 644 750 - -
Prci8g1212 1017 Gene3D Ribonuclease Inhibitor 49 156 IPR032675 -
Prci8g1212 1017 Gene3D Ribonuclease Inhibitor 157 229 IPR032675 -
Prci8g1212 1017 ProSiteProfiles Leucine-rich repeat profile. 303 325 IPR001611 GO:0005515
Prci8g1212 1017 Pfam Protein tyrosine and serine/threonine kinase 678 946 IPR001245 GO:0004672|GO:0006468
Prci8g1212 1017 SUPERFAMILY Protein kinase-like (PK-like) 659 949 IPR011009 -
Prci8g1212 1017 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 199 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1212 Prci-Chr8 8093939 8106775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1212 26 980 Receptor kinase-like Gene Family AT1G53440 52.169 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci8g1212 PK_Tyr_Ser-Thr 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1212 - - gmx:100784864 1367.83