Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1156 ATGGACGTTATTATTGTGAGAAGAGTTATTCCCTCAGATAATAGTTGCCTCTTCAATGCAGTTGGGTATGTTATGGATCATGACAAAACTAAAGCTCCTGAATTGAGACAGGTTATAGCTGCAACAGTGGCAAGTGATCCAGAGAAATATTCTGACGCATTTCTTGGAAAGCCAAATGCAGAATATTGTGCCTGGATCCTTGACTCTGAGAAATGGGGAGGTGCAATTGAGCTTGCCATATTAGCGGATTATTATGGACGTGAAATCGGAGCATATGATATCCAAACAACGCGATGCGATGTGTATGGTCAGGACCAAAAGTATTCTGAAAGGGTCATGCTGATTTATGATGGTCTCCATTATGACGCATTAGCTGTGTCTCCCTCTGTGGGGGCCCCTGAGGAGTTTGATCAGACCATATTTGTTGTCCAGAGAGACAGAAGCATTGGACGTGTTGAGAGGCTTGCTCTTGATTTTGTTAGGGACCAACAAAGGAAACGAAGCTATACCGACACCGCCAACTTCACTCTCCGCTGTGGGGTATGCCAAATCGGTGTAGTTGGTCAGAAGGAGGCAATGGAGCACGCACGAGCAACAGGTCATGCTAACTTTCAAGAATATAGATGA 627 0.4466 MDVIIVRRVIPSDNSCLFNAVGYVMDHDKTKAPELRQVIAATVASDPEKYSDAFLGKPNAEYCAWILDSEKWGGAIELAILADYYGREIGAYDIQTTRCDVYGQDQKYSERVMLIYDGLHYDALAVSPSVGAPEEFDQTIFVVQRDRSIGRVERLALDFVRDQQRKRSYTDTANFTLRCGVCQIGVVGQKEAMEHARATGHANFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1156 208 Pfam OTU-like cysteine protease 12 102 IPR003323 -
Prci8g1156 208 SUPERFAMILY Cysteine proteinases 7 124 IPR038765 -
Prci8g1156 208 CDD OTU_plant_OTU1_2-like 4 166 - -
Prci8g1156 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 - -
Prci8g1156 208 Gene3D - 1 173 - -
Prci8g1156 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Prci8g1156 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1156 Prci-Chr8 7699807 7704090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1156 1 208 C2H2 Transcription Factor Family AT1G50670 78.846 9.33e-126 352