Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1152 ATGGACGTTATTATTGTGAGAAGAGTTATTCCCTCAGATAATAGTTGCCTCTTCAATGCAGTTGGGTATGTTATGGATCATGACAAAACTAAAGCTCCTGAATTGAGACAGGTTATAGCTGCAACAGTGGCAAGTGATCCAGAGAAATATTCTGACGCATTTCTTGGAAAGCCAAATGCAGAATATTGTGCCTGGATCCTTGACTCTGAGAAATGGGGAGGTGCAATTGAGCTTGCCATATTAGCGGATTATTATGGACGTGAAATCGGAGCATATGATATCCAAACAACGCGATGCGATGTGTATGGTCAGGACCAAAAGTATTCTGAAAGGGTCATGCTGATTTATGATGGTCTCCATTATGACGCATTAGCTGTGTCTCCCTCTGTGGGGGCCCCTGAGGAGTTTGATCAGACCATATTTGTTGTCCAGAGAGACAGAAGCATTGGACGTGTTGAGAGGCTTGCTCTTGATTTTGTTAGGGACCAACAAAGGAAACGAAGCTATACCGACACCGCCAACTTCACTCTCCGCTGTGGGGTATGCCAAATCGGTGTAGTTGGTCAGAAGGAGGCAATGGAGCACGCACGAGCAACAGGTCATGCTAACTTTCAAGAATATAGATGA 627 0.4466 MDVIIVRRVIPSDNSCLFNAVGYVMDHDKTKAPELRQVIAATVASDPEKYSDAFLGKPNAEYCAWILDSEKWGGAIELAILADYYGREIGAYDIQTTRCDVYGQDQKYSERVMLIYDGLHYDALAVSPSVGAPEEFDQTIFVVQRDRSIGRVERLALDFVRDQQRKRSYTDTANFTLRCGVCQIGVVGQKEAMEHARATGHANFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1152 208 Pfam OTU-like cysteine protease 12 102 IPR003323 -
Prci8g1152 208 SUPERFAMILY Cysteine proteinases 7 124 IPR038765 -
Prci8g1152 208 CDD OTU_plant_OTU1_2-like 4 166 - -
Prci8g1152 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 - -
Prci8g1152 208 Gene3D - 1 173 - -
Prci8g1152 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Prci8g1152 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1152 Prci-Chr8 7699372 7704090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1152 1 208 C2H2 Transcription Factor Family AT1G50670 78.846 9.33e-126 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1152 K13719 - nnu:104610922 377.867