Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1150 ATGGAAGAAGCAGCAGCATTGTTCTTAACAAGGCGTAAGGAGATTGTTTGTGTGTGTGTTGGAATGTTCATGAAAGTTCTGGAACGAGTTGGTTTCGCAGCATTCACTTGCATTCTCGCACTAGGAGGGTCAATAATGGGGACAATAGTGGGAGGGATGAAGGGACAGAGATCAGAAGCAGGGATGCTTGATGGAGCTGGGAAAGGAGCAGTGGCAGGAGCCATTGCCGCTCTCGAATTGCTTGATTTTGCTGCTCCAGATGATGATGATGGCCATCGTCATAATCATGAGCCTTTGTCCAAGGTTGCCTTATTAAGCAATCTATTCAATGGAAAGGTCCTAATGGAATGGGTATATCCAGCCTATCAATGGCATATTGGGATACCAGAAACAGTGTACAGAGAAGTATCAGATATTTATGACATGAGAGGAGTGCCAGGGTTGTCTCAGAAATTGATTCAAAGCCTCCCTTTGAATCAATTCAACTCCACAAAAGTGTTGGCTTTATACAATGAATCCTTCTGCTCCATTTGCTTCCAGGAGTTTGAAGATGAAGATGTGGTGAGGAAGCTTCCAAAATGTGACCATATTTTTCACTTTCACTGTGTTGATAAATGGCTCATCCAACAAGGATCTTGCCCAATGTGCAGAACTTTTGTTCTTGAAGATCATTTTGATATTTAG 684 0.4269 MEEAAALFLTRRKEIVCVCVGMFMKVLERVGFAAFTCILALGGSIMGTIVGGMKGQRSEAGMLDGAGKGAVAGAIAALELLDFAAPDDDDGHRHNHEPLSKVALLSNLFNGKVLMEWVYPAYQWHIGIPETVYREVSDIYDMRGVPGLSQKLIQSLPLNQFNSTKVLALYNESFCSICFQEFEDEDVVRKLPKCDHIFHFHCVDKWLIQQGSCPMCRTFVLEDHFDI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1150 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 221 IPR013083 -
Prci8g1150 227 Pfam Ring finger domain 175 217 IPR001841 -
Prci8g1150 227 ProSiteProfiles Zinc finger RING-type profile. 175 217 IPR001841 -
Prci8g1150 227 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 17 218 IPR044523 -
Prci8g1150 227 CDD RING-H2_PA-TM-RING 175 217 - -
Prci8g1150 227 SUPERFAMILY RING/U-box 169 223 - -
Prci8g1150 227 SMART ring_2 175 216 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1150 Prci-Chr8 7684028 7686357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1150 33 217 C3H Transcription Factor Family AT5G66070 31.250 8.24e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1150 - K19041 gmx:100305612 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g1150 8 7684028 7686357 Prci8g1150 8 7684028 7686357 ECH