Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1149 ATGGAAGAAGCAGCAGCATTGTTCTTAACAAGGCGTAAGGAGATTGTTTGTGTGTGTGTTGGAATGTTCATGAAAGTTCTGGAACGAGTTGGTTTCGCAGCATTCACTTGCATTCTCGCACTAGGAGGGTCAATAATGGGGACAATAGTGGGAGGGATGAAGGGACAGAGATCAGAAGCAGGGATGCTTGATGGAGCTGGGAAAGGAGCAGTGGCAGGAGCCATTGCCGCTCTCGAATTGCTTGATTTTGCTGCTCCAGATGATGATGATGGCCATCGTCATAATCATGAGCCTTTGTCCAAGATTGGGATACCAGAAACAGTGTACAGAGAAGTATCAGATATTTATGACATGAGAGGAGTGCCAGGGTTGTCTCAGAAATTGATTCAAAGCCTCCCTTTGAATCAATTCAACTCCACAAAAGTGTTGGCTTTATACAATGAATCCTTCTGCTCCATTTGCTTCCAGGAGTTTGAAGATGAAGATGTGGTGAGGAAGCTTCCAAAATGTGACCATATTTTTCACTTTCACTGTGTTGATAAATGGCTCATCCAACAAGGATCTTGCCCAATGTGCAGAACTTTTGTTCTTGAAGATCATTTTGATATTTAG 612 0.4314 MEEAAALFLTRRKEIVCVCVGMFMKVLERVGFAAFTCILALGGSIMGTIVGGMKGQRSEAGMLDGAGKGAVAGAIAALELLDFAAPDDDDGHRHNHEPLSKIGIPETVYREVSDIYDMRGVPGLSQKLIQSLPLNQFNSTKVLALYNESFCSICFQEFEDEDVVRKLPKCDHIFHFHCVDKWLIQQGSCPMCRTFVLEDHFDI 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1149 203 SUPERFAMILY RING/U-box 145 199 - -
Prci8g1149 203 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 17 83 IPR044523 -
Prci8g1149 203 Pfam Ring finger domain 151 193 IPR001841 -
Prci8g1149 203 ProSiteProfiles Zinc finger RING-type profile. 151 193 IPR001841 -
Prci8g1149 203 SMART ring_2 151 192 IPR001841 -
Prci8g1149 203 CDD RING-H2_PA-TM-RING 151 193 - -
Prci8g1149 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 197 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1149 Prci-Chr8 7684028 7686357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1149 33 193 C3H Transcription Factor Family AT5G66070 29.630 1.01e-25 97.4