Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1148 ATGGGTCTGTGTTTGGGTAAAGGCAAAGATTCAGAGCGAGACTATAATGGATACAGGTCAGTTGGTGAAACCGGAGCGCAGAATTACAAAGCCTATGAACCCCATGTGAATCAACCGAAACCCACTTCTCATCAGCCGTATCATTTACCCGAAAAACCCTCTGCCAGGGCTTCCCTAAATCCTAATAAGCCCGGTCACAATACAATTCTGGGGAAGCAATTTGAGGATGTGAAGCAATTTTACAGGATTGGGAAAGAACTGGGAAGGGGCCAATTTGGTGTGACCTATCTCTGCACTGAGATTTCAACTGGCAGACCATACGCTTGCAAGTCAATCTCGAAGAGGAAGCTTACGAGCAAAGCTGATAGGGAGGATATGAAGAGGGAGATTCATATTATGCAGCATTTGAGTGGACAGCCCAATATTGTGGAGTTCAAAGGTGCTTATGAGGATAGTCAATCTGTACATCTTGTGATGGAGCTGTGTGCAGGTGGTGAGCTCTTTGATCGGATTATTGCCAAGGGGCATTACAGTGAAAGAGCTGCTGCTTCTATATGTAGACAGATTGTTAATGTTGTTCATATCTGCCACTTTATGGGTGTGATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTGTCCAGTAAGGATGAAAAGGCACTTCTCAAAGCCACAGATTTCGGTTTGTCGGTTTTCATAGAGGAAGGTAAGGTCTATCGGGATATAGTTGGGAGTGCTTATTATGTTGCTCCTGAAGTCCTACGACGCAGATATGGGAAGGAAATTGACATATGGAGTGCAGGAGTGATATTGTATATCTTACTCAGTGGTGTACCTCCTTTTTGGGCTGAGACGGAAAGGGGAATATTTGATGCCATTTTGGAAGGCCATATCGATTTTGAGAGTCAACCATGGCCAAGCATATCAAACAGTGCCAAGGATCTTGTTCGTAAGATGCTGACACAAGACCCAAAAAAGCGCATTACTTCTGCTCAGGTTCTTGAGCACCCATGGATTAGAGAAGATGGAAATGCTTCTGACAAGCCGATAGATAGCGCAGTCCTTTCCAGAATGAAGCAATTCAGAGCTATGAATAAGCTAAAGAAACTTGCCCTGAAGGTCATCGCTGAAAATCTTTCTGAAGAAGAGATCCAAGGGTTGAAGGCAATGTTTACAAATATGGACACCGACAAGAGCGGTACAATCACCTATGAAGAACTAAAGGAGGGATTGCAGAGACTTGGCTCGAAGCTCACAGAGGCCGAAGTGAAGCAGCTTATGGAAGCTGCTGATGTAGATGGAAATGGCACCATTGACTATATAGAGTTTATCACTGCCACAATGCATAGACATAGATTAGAGAGAGATGAGCATCTCTACAAAGCCTTCCAGTATTTTGATAAAGATAACAGTGGGCACATAACGAGAGATGAACTTGAAACGGCCATGAAAGAATACGGCATGGGCGATGAAGGCACAATCAAGGAAATCATATCAGAAGTTGACACAGATAATGATGGTAGAATCAATTATGACGAATTCTGTGCAATGATGAGGAGCGGAAACCCACAAGGCAAGTTATTCTGA 1587 0.4367 MGLCLGKGKDSERDYNGYRSVGETGAQNYKAYEPHVNQPKPTSHQPYHLPEKPSARASLNPNKPGHNTILGKQFEDVKQFYRIGKELGRGQFGVTYLCTEISTGRPYACKSISKRKLTSKADREDMKREIHIMQHLSGQPNIVEFKGAYEDSQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDEKALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETERGIFDAILEGHIDFESQPWPSISNSAKDLVRKMLTQDPKKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFTNMDTDKSGTITYEELKEGLQRLGSKLTEAEVKQLMEAADVDGNGTIDYIEFITATMHRHRLERDEHLYKAFQYFDKDNSGHITRDELETAMKEYGMGDEGTIKEIISEVDTDNDGRINYDEFCAMMRSGNPQGKLF 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1148 528 SUPERFAMILY Protein kinase-like (PK-like) 80 346 IPR011009 -
Prci8g1148 528 ProSiteProfiles EF-hand calcium-binding domain profile. 494 524 IPR002048 GO:0005509
Prci8g1148 528 Gene3D Phosphorylase Kinase; domain 1 83 166 - -
Prci8g1148 528 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Prci8g1148 528 SMART serkin_6 81 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1148 528 ProSitePatterns EF-hand calcium-binding domain. 467 479 IPR018247 -
Prci8g1148 528 FunFam calcium-dependent protein kinase 1 167 346 - -
Prci8g1148 528 Gene3D - 348 521 - -
Prci8g1148 528 FunFam Calcium-dependent protein kinase 1 347 522 - -
Prci8g1148 528 ProSiteProfiles EF-hand calcium-binding domain profile. 454 489 IPR002048 GO:0005509
Prci8g1148 528 CDD EFh_PI-PLC 387 520 - -
Prci8g1148 528 ProSiteProfiles Protein kinase domain profile. 81 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1148 528 MobiDBLite consensus disorder prediction 1 64 - -
Prci8g1148 528 ProSitePatterns EF-hand calcium-binding domain. 431 443 IPR018247 -
Prci8g1148 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Prci8g1148 528 SMART efh_1 386 414 IPR002048 GO:0005509
Prci8g1148 528 SMART efh_1 493 521 IPR002048 GO:0005509
Prci8g1148 528 SMART efh_1 458 486 IPR002048 GO:0005509
Prci8g1148 528 SMART efh_1 422 450 IPR002048 GO:0005509
Prci8g1148 528 CDD EFh 461 519 IPR002048 GO:0005509
Prci8g1148 528 PANTHER SERINE/THREONINE-PROTEIN KINASE 75 514 - -
Prci8g1148 528 Pfam EF-hand domain pair 387 447 IPR002048 GO:0005509
Prci8g1148 528 Pfam EF-hand domain pair 457 519 IPR002048 GO:0005509
Prci8g1148 528 Pfam Protein kinase domain 81 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1148 528 ProSitePatterns EF-hand calcium-binding domain. 395 407 IPR018247 -
Prci8g1148 528 CDD STKc_CAMK 80 338 - -
Prci8g1148 528 SUPERFAMILY EF-hand 378 518 IPR011992 -
Prci8g1148 528 Gene3D Transferase(Phosphotransferase) domain 1 167 347 - -
Prci8g1148 528 ProSiteProfiles EF-hand calcium-binding domain profile. 418 453 IPR002048 GO:0005509
Prci8g1148 528 ProSitePatterns EF-hand calcium-binding domain. 502 514 IPR018247 -
Prci8g1148 528 FunFam Calcium-dependent protein kinase 1 83 166 - -
Prci8g1148 528 ProSiteProfiles EF-hand calcium-binding domain profile. 382 417 IPR002048 GO:0005509
Prci8g1148 528 Coils Coil 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1148 Prci-Chr8 7670157 7674422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1148 1 524 EF-hand Containing Proteins AT3G20410 76.340 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci8g1148 Pkinase 3.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1148 K13412 - qsa:O6P43_013720 895.575