Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1147 ATGAGTGATCGTTCCTTGTTTTCCTGCAATAGGCGTTTGGTAGGGCTTAAACACGGGAGATTTTCCCTTGGATTCTGTAGAAGTTACGGCCCTCTCCTGGTTGTTGAAACATTTGTGTGTTTAATTGCTCATCTGCTTTCTGTGTTTTCTAGGTCCTCAAGAGCTCACCAAACAAAGTACATGGTTGAGTTGGAAGTTCAGATTCCTACTCCCTTCGATCCATTCGCAGAAGCCAGAGAATCGGATGCTCCCGGAACCAAAGGGTATGTGCATATCAGGATTCAACAGAGGAATGGAAAAAAGAGTCTGACCACGGTGCAAGGACTGAAGAAGGAGTTCAGCTACGAGAAGATCCTCAAGGATCTTAAGAAGGAGTTCTGTTGCAACGGCAACGTTGTGCAGGACAAGGAGCTCGGCAAGATCATCCAACTTCAAGGTGATCAGCGCAAGAACGTCTCTCAATTCCTGGTTCAGGCCGGTCTGGTCAGGAAGGACCAGATCAAGATTCATGGTTTTTGA 519 0.4663 MSDRSLFSCNRRLVGLKHGRFSLGFCRSYGPLLVVETFVCLIAHLLSVFSRSSRAHQTKYMVELEVQIPTPFDPFAEARESDAPGTKGYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVRKDQIKIHGF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1147 172 SUPERFAMILY eIF1-like 59 172 IPR036877 GO:0003743|GO:0006413
Prci8g1147 172 NCBIfam translation initiation factor SUI1 66 172 IPR005874 GO:0003743
Prci8g1147 172 Gene3D - 50 172 - -
Prci8g1147 172 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 66 172 - -
Prci8g1147 172 CDD eIF1_SUI1 88 171 IPR005874 GO:0003743
Prci8g1147 172 ProSiteProfiles Translation initiation factor SUI1 family profile. 90 160 IPR001950 GO:0003743|GO:0006413
Prci8g1147 172 FunFam Eukaryotic translation initiation factor SUI1 62 172 - -
Prci8g1147 172 Pfam Translation initiation factor SUI1 87 160 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1147 Prci-Chr8 7662846 7663930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1147 61 172 Eukaryotic Initiation Factors Gene Family AT5G54940 83.036 5.90e-68 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1147 K03113 - gmx:100787664 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g1147 8 7662846 7663930 Prci8g1147 8 7662846 7663930 ECH