LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci8g1140	ATGGCAAACGTGAATAGTCATAACGATGAGGAGAATAATGAACATGGGTTACCTTCGGTTATCGGCGTTGGCGAAGGAAATGGTGGTGGTGAGGGTGCCGGTGGGGCAACGGCAGCAGCGGAGGAGGTTGTCCTCAAGAAGGGTCCATGGACAGCGGCGGAGGATGCGGTGCTTATTGATTATGTGACGAAGCATGGTGAAGGGAATTGGAACGCGGTGCAAAGGAATACGGGTTTGGCTCGCTGTGGCAAGAGCTGTAGGTTGAGATGGACGAACCATTTACGCCCCAATCTGAAGAAGGGAGCTTTCTCTCCTGAGGAAGAGAAGCTCATTCTGGAGCTTCATGCTCAGTTTGGCAACAAATGGGCTCGAATGGCCACTCTCTTACCTGGGCGAACAGACAATGAAATTAAGAACTACTGGAACACAAGGGTGAAGCGTCGGCAAAGGCAAGGCCTGCCACTTTATTCCAGTGATTCTGATCAAACAACCACATCTGCAGCCCCAGCCACCTCTTGCACACGACCATTCACAGGATCCACTGCTACGAAATTGGATTATTATATTCAGAACCCCTATCCTCTGTCTTCCTTCCATGCAGGATCCTCCTATTCCACTCACACCCCTTTCTTGGACCCCAATTCTCTGTCTTCTTCTTCCTTTCTTTCCTTCCCCTCTCACCAGCCTACTTCTTCATTACATATCGCTCCCCTTCATTCCAAACGTTGCCGTACCTCTTTGTCCCTCCCAGATGCACAATTAACTACCCCATTAGTGGATCTTGATGGACTCAACTTTCCATCCCAATTTAATTCGAGTTCATGTCAAATCTTCCAGTCCCCGTTAGAGTCATCATCTTCAGTTCCCGGGGTTCCAAGCTCATCTTCCATTTTGTCCACCAAAATGGAGCTCCCTTCAAACCAATTTTCCCAATCCAATAACGACCTGCTGGGAGATCTTCTCCTGGAAGCTCAAGTATTGGTTTCTGGCCAGAATTTGAAGAAACGGACATATTCGAGTTTCAGTGAAGGAAATGGTTTCCTAGATGGATATATGGGCTTGGATGATTTGCCGCAAAGCTCAGTTTACTGGTCTTCAGGACTGCAACCAAAGTCAGAACCATCAGACATGAGCAAATCCATGAATGATCTTTCCACACTGATATCTGAAATGCCTTCCACCATTCAGGTTCCTGAATGGCACAATGACATAACTGTACAAGCCTCCAATATTGAAACTTCTGGTGCTATAATGGGTGATGATAATTTTGAACTTGACTTCAAGCCTATCACTTCGTTGATTCCTGTCAACACCACGGCAAACCCTAATGAAAATCCTGGTTTCTTCTCATGGGATACCTTACCTGGACTCTGCTGA	1377	0.4699	MANVNSHNDEENNEHGLPSVIGVGEGNGGGEGAGGATAAAEEVVLKKGPWTAAEDAVLIDYVTKHGEGNWNAVQRNTGLARCGKSCRLRWTNHLRPNLKKGAFSPEEEKLILELHAQFGNKWARMATLLPGRTDNEIKNYWNTRVKRRQRQGLPLYSSDSDQTTTSAAPATSCTRPFTGSTATKLDYYIQNPYPLSSFHAGSSYSTHTPFLDPNSLSSSSFLSFPSHQPTSSLHIAPLHSKRCRTSLSLPDAQLTTPLVDLDGLNFPSQFNSSSCQIFQSPLESSSSVPGVPSSSSILSTKMELPSNQFSQSNNDLLGDLLLEAQVLVSGQNLKKRTYSSFSEGNGFLDGYMGLDDLPQSSVYWSSGLQPKSEPSDMSKSMNDLSTLISEMPSTIQVPEWHNDITVQASNIETSGAIMGDDNFELDFKPITSLIPVNTTANPNENPGFFSWDTLPGLC	458

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci8g1140	458	MobiDBLite	consensus disorder prediction	151	173	-	-
	Prci8g1140	458	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	95	149	IPR017930	-
	Prci8g1140	458	Gene3D	-	46	99	-	-
	Prci8g1140	458	ProSiteProfiles	Myb-like domain profile.	42	94	IPR001005	-
	Prci8g1140	458	SMART	sant	99	147	IPR001005	-
	Prci8g1140	458	SMART	sant	46	96	IPR001005	-
	Prci8g1140	458	FunFam	Transcription factor GAMYB	102	148	-	-
	Prci8g1140	458	SUPERFAMILY	Homeodomain-like	46	141	IPR009057	-
	Prci8g1140	458	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	45	94	IPR017930	-
	Prci8g1140	458	ProSiteProfiles	Myb-like domain profile.	95	145	IPR001005	-
	Prci8g1140	458	PANTHER	TRANSCRIPTION FACTOR MYB33-RELATED	28	406	-	-
	Prci8g1140	458	Pfam	Myb-like DNA-binding domain	47	94	IPR001005	-
	Prci8g1140	458	Pfam	Myb-like DNA-binding domain	100	143	IPR001005	-
	Prci8g1140	458	MobiDBLite	consensus disorder prediction	153	173	-	-
	Prci8g1140	458	FunFam	MYB-related transcription factor	46	99	-	-
	Prci8g1140	458	CDD	SANT	49	94	IPR001005	-
	Prci8g1140	458	MobiDBLite	consensus disorder prediction	1	35	-	-
	Prci8g1140	458	CDD	SANT	102	143	IPR001005	-
	Prci8g1140	458	Gene3D	-	102	148	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci8g1140	Prci-Chr8	7616284	7619529	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci8g1140	33	156	MYB Transcription Factor Family	AT3G11440	75.806	1.09e-65	219

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Prci8g1140		Myb_DNA-binding	1.5e-12	CL0123