Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1125 ATGGCGAATTTGCCCCAATCGCTCTCCATGAATGCGCCTTTCGGAGCTCCCGGTGCCTCCGCCCAGAACGCCGCTTCTACTCAAGTCAACAAGGAGCGTAAGCTGGCGTCTGCAGAGCACCTTGTTCTTGAACTGAGCAACCCCGATCTCCGAGAAAATGCGCTTCTTGAACTCTCCAAGAAAAGAGAATTATTTCAAGATCTTGCCCCGTTACTTTGGAATTCTTTTGGTACTATTGCAGCACTTTTGCAGGAAATAGTTTCAATATACCCCGTTCTATCACCACCAAATCTTACCCCAGCACAATCAAACCGAGTGTGCAATGCTCTTGCTCTTCTTCAATGTGTAGCTTCTCATCCAGAGACAAGGATGCTATTCCTCAATGCTCATATACCTCTATATCTGTATCCGTTCCTTAATACAACGAGCAAGTCTAGACCATTTGAGTATTTGAGGCTTACCAGTCTTGGTGTCATTGGTGCCTTGGTGAAGGTTGATGATACCGAAGTTATAAGCTTCCTTCTGTCAACAGAAATAATTCCTCTCTGCCTGCGCACAATGGAAATGGGCAGCGAATTGTCAAAAACAGTTGCAACATTTATAGTCCAGAAGATTCTATTAGACGATGTTGGGTTGGATTATATATGTACTACCGCAGAACGGTTTTTTGCAGTAGGTAGAGTTTTGGGAAACATGGTGCAAGCTCTTGCCGAGCAACCATCATCTCGTCTGTTGAAACATATAATTAGATGTTATCTCCGCCTGTCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGTTGTCTTCCAGACATGTTAAGAGATGCTACTTTCAGTAGCTGCCTCCGGGAAGACCCAACAACCAGGAGGTGGCTACAACAGTTGCTTATTAATGTTGGAGTTAATCGTGTTCCTGGTGGGCTGCAAGCTGGTGGTGGTTTCGAACATATGATGGTGTCATAA 963 0.4465 MANLPQSLSMNAPFGAPGASAQNAASTQVNKERKLASAEHLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPETRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVQALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLINVGVNRVPGGLQAGGGFEHMMVS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1125 320 Pfam Cell differentiation family, Rcd1-like 41 299 - -
Prci8g1125 320 SUPERFAMILY ARM repeat 43 272 IPR016024 -
Prci8g1125 320 PANTHER UNCHARACTERIZED 31 302 IPR007216 GO:0006402|GO:0030014
Prci8g1125 320 Gene3D - 30 300 IPR011989 -
Prci8g1125 320 FunFam Cell differentiation protein RCD1 31 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1125 Prci-Chr8 7515743 7521032 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Prci8g1125 Rcd1 1.1e-129 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1125 K12606 - pop:7470819 580.096